RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PRG3Q9Y2Y8 225 aaPredicted RBP10.25□□□□□ -0.77
RFFL-210ENST00000582308 TSC2P49815 1807 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 TRIOBPQ9H2D6 2365 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 KPNA7A9QM74 516 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 NT5C1B-RDH14C9J2C7 533 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 ARHGEF15O94989 841 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 PNPLA4P41247 253 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFFL-210ENST00000582308 TAF6P49848 677 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 MYO1EQ12965 1108 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 WDR72Q3MJ13 1102 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 TIGD5Q53EQ6 642 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 WDR44Q5JSH3 913 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 KCNT2Q6UVM3 1135 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 TMEM173Q86WV6 379 aaPredicted RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 COLGALT1Q8NBJ5 622 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 HASPINQ8TF76 798 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 BCL7CQ8WUZ0 217 aaPredicted RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 CLP1Q92989 425 aaKnown RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 KAT5Q92993 513 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 PCMTD1Q96MG8 357 aaPredicted RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 ZNF560Q96MR9 790 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 KREMEN1Q96MU8 473 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 NT5C1BQ96P26 610 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 COLEC11Q9BWP8 271 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 IMPG2Q9BZV3 1241 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 MARCH5Q9NX47 278 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 GDAP2Q9NXN4 497 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 APEX2Q9UBZ4 518 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 R3HCC1Q9Y3T6 440 aaKnown RBP10.24□□□□□ -0.77
RFFL-210ENST00000582308 MYH10P35580 1976 aa10.24□□□□□ -0.77
RFFL-210ENST00000582308 LINC01553A4QN01 128 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 I3L4J1 428 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 UCHL3P15374 230 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 LAG3P18627 525 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 PBX2P40425 430 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ASPAP45381 313 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 BRCC3P46736 316 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 SV2CQ496J9 727 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ZNF667Q5HYK9 610 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SPOUT1Q5T280 376 aaKnown RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 SPECC1LQ69YQ0 1117 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 IQCEQ6IPM2 695 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 LIMS2Q7Z4I7 341 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 TDHQ8IZJ6 230 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SLC39A11Q8N1S5 342 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 CCDC150Q8NCX0 1101 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 NEK11Q8NG66 645 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SENP8Q96LD8 212 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ZNF558Q96NG5 402 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ARID3AQ99856 593 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 TTYH3Q9C0H2 523 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 NIF3L1Q9GZT8 377 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SDCBP2Q9H190 292 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SMYD3Q9H7B4 428 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 UBE2TQ9NPD8 197 aaPredicted RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 ADAM28Q9UKQ2 775 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
RFFL-210ENST00000582308 PCDHA11Q9Y5I1 949 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 SNX9Q9Y5X1 595 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 FHOD1Q9Y613 1164 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 ITIH6Q6UXX5 1313 aa10.23□□□□□ -0.77
RFFL-210ENST00000582308 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.22□□□□□ -0.77
RFFL-210ENST00000582308 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.22□□□□□ -0.77
RFFL-210ENST00000582308 M0QZQ0 153 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 CYB561D2O14569 222 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 TADA2AO75478 443 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 EFEMP2O95967 443 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 WEE2P0C1S8 567 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 PAX3P23760 479 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 CDC25BP30305 580 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 RAP1GAPP47736 663 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 CDH8P55286 799 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 TNNC1P63316 161 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 GCNT1Q02742 428 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 TBX2Q13207 712 aaPredicted RBP10.22□□□□□ -0.77
RFFL-210ENST00000582308 CUL2Q13617 745 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 SCARA5Q6ZMJ2 495 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 TMC6Q7Z403 805 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 PPM1KQ8N3J5 372 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 IGSF21Q96ID5 467 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 FAXDC2Q96IV6 333 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 SUSD3Q96L08 255 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 NUP58Q9BVL2 599 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 VN1R3Q9BXE9 311 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 GPR62Q9BZJ7 368 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 NLRC4Q9NPP4 1024 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 SPG21Q9NZD8 308 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 FBXL5Q9UKA1 691 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms