RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 BORCS6Q96GS4 357 aa22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 ANKRD36BP1Q96IX9 119 aa22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 FNBP1Q96RU3 617 aa22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 MAN1C1Q9NR34 630 aa22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 USP15Q9Y4E8 981 aaPredicted RBP22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 BRWD1Q9NSI6 2320 aa22.34■■□□□ 1.17
PPP4R1-221ENST00000582240 VWA8A3KMH1 1905 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 SPDYE4A6NLX3 237 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 TAF6P49848 677 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 PMS1P54277 932 aaKnown RBP22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 BFSP1Q12934 665 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 SMAD4Q13485 552 aaKnown RBP22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 MRPL58Q14197 206 aaKnown RBP22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 CTXN3Q4LDR2 81 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 LILRA6Q6PI73 481 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 TMC5Q6UXY8 1006 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 ANKS3Q6ZW76 656 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 SLC9A9Q8IVB4 645 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 GBP4Q96PP9 640 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 CGRRF1Q99675 332 aa22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-221ENST00000582240 SPTBN5Q9NRC6 3674 aaKnown RBP22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 FSD2A1L4K1 749 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 TRIM49BA6NDI0 452 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 CYB561D2O14569 222 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 RFPL2O75678 378 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 TNNC2P02585 160 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 NR2F2P24468 414 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 CDR1P51861 262 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 DLG4P78352 724 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 CREMQ03060 361 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 DUOXA2Q1HG44 320 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 ZCWPW2Q504Y3 356 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 PDXDC1Q6P996 788 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 WDR49Q8IV35 697 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 ADSSL1Q8N142 457 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 SMRP1Q8NCR6 262 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 KREMEN2Q8NCW0 462 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 APPL2Q8NEU8 664 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 ADAMTS19Q8TE59 1207 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 FBXL5Q9UKA1 691 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 BACE2Q9Y5Z0 518 aa22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 TCF20Q9UGU0 1960 aaKnown RBP22.32■■□□□ 1.16
PPP4R1-221ENST00000582240 LRRIQ3A6PVS8 624 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 H7C4K7 107 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 TBC1D4O60343 1298 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 CST3P01034 146 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 OR4Q2P0C623 313 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 RBP5P82980 135 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 ADAM9Q13443 819 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 MORC3Q14149 939 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 ANKRD40Q6AI12 368 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 KLHL10Q6JEL2 608 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 TRAPPC11Q7Z392 1133 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 ELMO3Q96BJ8 720 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 COL25A1Q9BXS0 654 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 DZANK1Q9NVP4 752 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 ITGA11Q9UKX5 1188 aa22.31■■□□□ 1.16
PPP4R1-221ENST00000582240 KPNA7A9QM74 516 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 AKAP3O75969 853 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 HOXB8P17481 243 aaPredicted RBP22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 RAB33AQ14088 237 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 WSCD1Q658N2 575 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 USP37Q86T82 979 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 PARD3BQ8TEW8 1205 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 TMEM209Q96SK2 561 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 CLSTN2Q9H4D0 955 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 FRMD4BQ9Y2L6 1034 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 PLXNA3P51805 1871 aa22.3■■□□□ 1.16
PPP4R1-221ENST00000582240 PPP1R3GB7ZBB8 358 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 ODC1P11926 461 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 ROR1Q01973 937 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 YWHAHQ04917 246 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 MYBPC2Q14324 1141 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 SMAD2Q15796 467 aaKnown RBP22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 NFIL3Q16649 462 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 PUS10Q3MIT2 529 aaKnown RBP22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 SV2CQ496J9 727 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 CENPPQ6IPU0 288 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 ZNF280DQ6N043 979 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 ZNF560Q96MR9 790 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 ADAM7Q9H2U9 754 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 KIAA1468Q9P260 1216 aa22.29■■□□□ 1.16
PPP4R1-221ENST00000582240 CCDC195A0A1B0GUA6 201 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 WDR27A2RRH5 827 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 TYMPP19971 482 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 STX17P56962 302 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 COBLL1Q53SF7 1204 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 C1orf220Q5T0J3 134 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 OVOS1Q6IE37 1185 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 FAM186BQ8IYM0 893 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 GPT2Q8TD30 523 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 TMEM174Q8WUU8 243 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 SUSD6Q92537 303 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 HPDLQ96IR7 371 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 UHRF1Q96T88 793 aaPredicted RBP22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 FBXW11Q9UKB1 542 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 SCN1AP35498 2009 aa22.28■■□□□ 1.16
PPP4R1-221ENST00000582240 OAZ2O95190 189 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 TRIM49P0CI25 452 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms