RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 MRPL4Q9BYD3 311 aaKnown RBP10.86□□□□□ -0.67
RFFL-208ENST00000581039 TMEM134Q9H6X4 195 aa10.86□□□□□ -0.67
RFFL-208ENST00000581039 PHLPP2Q6ZVD8 1323 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 A0A1W2PRU2 124 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 SPECC1L-ADORA2AF8WAN1 911 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 AXIN1O15169 862 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 HOXA6P31267 233 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 CCT6AP40227 531 aaKnown RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 NPTX2P47972 431 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 PEX3P56589 373 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 FCHO2Q0JRZ9 810 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFFL-208ENST00000581039 ZNF174Q15697 407 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 Q6ZS52 159 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 GPIHBP1Q8IV16 184 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 ARID3BQ8IVW6 561 aaPredicted RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 SYNPOQ8N3V7 929 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 C12orf50Q8NA57 414 aaPredicted RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 TTC8Q8TAM2 541 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 TARS2Q9BW92 718 aaKnown RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 OXCT2Q9BYC2 517 aaPredicted RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 CNTN3Q9P232 1028 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 PCDHB8Q9UN66 801 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 RBM19Q9Y4C8 960 aaKnown RBP10.85□□□□□ -0.67
RFFL-208ENST00000581039 YIPF1Q9Y548 306 aa10.85□□□□□ -0.67
RFFL-208ENST00000581039 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 OAZ2O95190 189 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 HARSP12081 509 aaKnown RBP10.84□□□□□ -0.67
RFFL-208ENST00000581039 CTHP32929 405 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 LIMK1P53667 647 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
RFFL-208ENST00000581039 DUSP4Q13115 394 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 DMP1Q13316 513 aaPredicted RBP10.84□□□□□ -0.67
RFFL-208ENST00000581039 PON2Q15165 354 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 ME3Q16798 604 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 TXNDC11Q6PKC3 985 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 MPZL3Q6UWV2 235 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 CACNA2D4Q7Z3S7 1137 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 USP37Q86T82 979 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 NSUN7Q8NE18 718 aaKnown RBP10.84□□□□□ -0.67
RFFL-208ENST00000581039 GTF3C6Q969F1 213 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 LOXL4Q96JB6 756 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 PGLYRP2Q96PD5 576 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 ATXN3LQ9H3M9 355 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 KMT5AQ9NQR1 393 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 GTSE1Q9NYZ3 720 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 LRWD1Q9UFC0 647 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 CNOT1A5YKK6 2376 aaKnown RBP10.84□□□□□ -0.67
RFFL-208ENST00000581039 NCANO14594 1321 aa10.84□□□□□ -0.67
RFFL-208ENST00000581039 CHD6Q8TD26 2715 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ZFHX4Q86UP3 3567 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 FGF19O95750 216 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 OR4Q2P0C623 313 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ZNF806P0C7X5 589 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 PROZP22891 400 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 PMLP29590 882 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 STRN3Q13033 797 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 GPR17Q13304 367 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ORC2Q13416 577 aaPredicted RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 PTPAQ15257 358 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 SF3A2Q15428 464 aaKnown RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 ECM1Q16610 540 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 SLC10A6Q3KNW5 377 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ARHGAP15Q53QZ3 475 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 DNAJB7Q7Z6W7 309 aaPredicted RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 BEST2Q8NFU1 509 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ZFYVE19Q96K21 471 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 DRC1Q96MC2 740 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 DDX19AQ9NUU7 478 aaKnown RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 THG1LQ9NWX6 298 aaKnown RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 OBP2AQ9NY56 170 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ARHGAP28Q9P2N2 729 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 DNM3Q9UQ16 869 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 SLC27A5Q9Y2P5 690 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 ASB3Q9Y575 518 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
RFFL-208ENST00000581039 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
RFFL-208ENST00000581039 TICRRQ7Z2Z1 1910 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 M0QZQ0 153 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 TM4SF5O14894 197 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 SLC16A4O15374 487 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 JAK2O60674 1132 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 ATG13O75143 517 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 HIP1RO75146 1068 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 TOM1L1O75674 476 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 RPP40O75818 363 aaKnown RBP10.82□□□□□ -0.68
RFFL-208ENST00000581039 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 SHC2P98077 582 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms