RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RBAK-RBAKDNI3L0D1 243 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 VNN1O95497 513 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 RFX1P22670 979 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 GUCY2FP51841 1108 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 YWHAEP62258 255 aaKnown RBP15.34■□□□□ 0.05
SKA2-205ENST00000580541 GSE1Q14687 1217 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 PDXDC1Q6P996 788 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 IGSF21Q96ID5 467 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 C11orf84Q9BUA3 381 aaPredicted RBP15.34■□□□□ 0.05
SKA2-205ENST00000580541 NUP58Q9BVL2 599 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 PBX4Q9BYU1 374 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 COL4A6Q14031 1691 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 SYN3O14994 580 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 ABCB7O75027 752 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 CA3P07451 260 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 ODC1P11926 461 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 PON1P27169 355 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 CTNNB1P35222 781 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 MRE11P49959 708 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 MFAP3P55082 362 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.04
SKA2-205ENST00000580541 PLCB3Q01970 1234 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 UBE3AQ05086 875 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 KIAA1841Q6NSI8 718 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 TMEM86AQ8N2M4 240 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 TOP6BLQ8N6T0 577 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 NEK11Q8NG66 645 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 CXorf38Q8TB03 319 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 JAKMIP2Q96AA8 810 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 SUSD3Q96L08 255 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 NAP1L5Q96NT1 182 aaPredicted RBP15.33■□□□□ 0.04
SKA2-205ENST00000580541 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 OXCT2Q9BYC2 517 aaPredicted RBP15.33■□□□□ 0.04
SKA2-205ENST00000580541 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
SKA2-205ENST00000580541 CYP3A43Q9HB55 503 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 PLCB1Q9NQ66 1216 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 NXF1Q9UBU9 619 aaKnown RBP15.33■□□□□ 0.04
SKA2-205ENST00000580541 LZTS1Q9Y250 596 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.33■□□□□ 0.04
SKA2-205ENST00000580541 SNX9Q9Y5X1 595 aa15.33■□□□□ 0.04
SKA2-205ENST00000580541 NT5C1B-RDH14C9J2C7 533 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 C5orf67F2Z3F1 127 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 CYB561D2O14569 222 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 KIF4AO95239 1232 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 TPM1P09493 284 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 AARSP49588 968 aaKnown RBP eCLIP15.32■□□□□ 0.04
SKA2-205ENST00000580541 ERVK-21P61565 698 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 SYCP1Q15431 976 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 USP41Q3LFD5 358 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 FAM109BQ6ICB4 259 aaPredicted RBP15.32■□□□□ 0.04
SKA2-205ENST00000580541 TRIM65Q6PJ69 517 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
SKA2-205ENST00000580541 THEM5Q8N1Q8 247 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 TIFAQ96CG3 184 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 SENP8Q96LD8 212 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 XPO4Q9C0E2 1151 aaKnown RBP15.32■□□□□ 0.04
SKA2-205ENST00000580541 NIF3L1Q9GZT8 377 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 XYLT2Q9H1B5 865 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 APEX2Q9UBZ4 518 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 PCDHB8Q9UN66 801 aa15.32■□□□□ 0.04
SKA2-205ENST00000580541 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
SKA2-205ENST00000580541 SCN1AP35498 2009 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 LCHNA4D1U4 455 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 M0QZQ0 153 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 FGF18O76093 207 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 MYOGP15173 224 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 SLC9A1P19634 815 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 TYMPP19971 482 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 DNAJB2P25686 324 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 LHX1P48742 406 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 GCNT1Q02742 428 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 TIGD5Q53EQ6 642 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 PDE12Q6L8Q7 609 aaKnown RBP15.31■□□□□ 0.04
SKA2-205ENST00000580541 FUT10Q6P4F1 479 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.31■□□□□ 0.04
SKA2-205ENST00000580541 GPR65Q8IYL9 337 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 ZNF397Q8NF99 534 aaPredicted RBP15.31■□□□□ 0.04
SKA2-205ENST00000580541 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 RABGGTAQ92696 567 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 PI4K2AQ9BTU6 479 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 NKX2-4Q9H2Z4 354 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
SKA2-205ENST00000580541 FBXL5Q9UKA1 691 aa15.31■□□□□ 0.04
SKA2-205ENST00000580541 TMEM265A0A087WTH1 108 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 H7C4K7 107 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 TEX33O43247 280 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 B4GALT3O60512 393 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 LPXNO60711 386 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms