RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 AGTP01019 485 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ATF2P15336 505 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ITIH2P19823 946 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 OSBPP22059 807 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MAGEA9P43362 315 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TAS2R40P59535 323 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MYL6P60660 151 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 YWHAEP62258 255 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LAMTOR4Q0VGL1 99 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MAMLD1Q13495 774 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SNX1Q13596 522 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 BYSLQ13895 437 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PWP2Q15269 919 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MAPK6Q16659 721 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SGSM1Q2NKQ1 1148 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SEZ6Q53EL9 994 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C6orf118Q5T5N4 469 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RHBDF2Q6PJF5 856 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MPZL3Q6UWV2 235 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 EXD1Q8NHP7 514 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MYCBPAPQ8TBZ2 947 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SNF8Q96H20 258 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MMP19Q99542 508 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HERPUD2Q9BSE4 406 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TCHPQ9BT92 498 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 STMN4Q9H169 189 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RASSF4Q9H2L5 321 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CHST7Q9NS84 486 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PARVAQ9NVD7 372 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ASIC3Q9UHC3 531 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GGA2Q9UJY4 613 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 AGTPBP1Q9UPW5 1226 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PTPN22Q9Y2R2 807 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FAM169AQ9Y6X4 670 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DNAJC25-GNG10A0A024R161 153 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 A0A087WUV0 522 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZBTB42B2RXF5 422 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 E7EVH7 732 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRIM66O15016 1216 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DDNO94850 711 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FAM107AO95990 144 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TNNC2P02585 160 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM191BP0C7N4 346 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RALAP11233 206 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FGFR4P22455 802 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PROZP22891 400 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MMP8P22894 467 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 BRD2P25440 801 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MARK3P27448 753 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLC26A2P50443 739 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TAP1Q03518 808 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PPIL2Q13356 520 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRPC3Q13507 836 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLC29A2Q14542 456 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KCTD2Q14681 263 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCNG2Q16589 344 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DUOXA2Q1HG44 320 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SKIDA1Q1XH10 827 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C2CD6Q53TS8 623 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DLK2Q6UY11 383 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DHX37Q8IY37 1157 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C10orf67Q8IYJ2 551 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LRRC71Q8N4P6 559 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RNF149Q8NC42 400 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM35BQ8NCS4 154 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ATL2Q8NHH9 583 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF606Q8WXB4 792 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ATG4AQ8WYN0 398 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CENPTQ96BT3 561 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RBM41Q96IZ5 413 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SPATA33Q96N06 139 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCT8L2Q96SF2 557 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ROPN1BQ9BZX4 212 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF518BQ9C0D4 1074 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SEMA4AQ9H3S1 761 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ROPN1Q9HAT0 212 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LRRC4CQ9HCJ2 640 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TCRBV5S1A1TA0A578 114 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C5orf60A6NFR6 353 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM191CA6NGB0 347 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ACKR2O00590 384 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ASAP2O43150 1006 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms