RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 SCARA5Q6ZMJ2 495 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 TMEM173Q86WV6 379 aaPredicted RBP11.46□□□□□ -0.57
USP22-208ENST00000578446 SLC39A11Q8N1S5 342 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
USP22-208ENST00000578446 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 TIFAQ96CG3 184 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 IGSF21Q96ID5 467 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 SAMD11Q96NU1 681 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 NT5C1BQ96P26 610 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 LSM14BQ9BX40 385 aaKnown RBP11.46□□□□□ -0.57
USP22-208ENST00000578446 TRIM5Q9C035 493 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
USP22-208ENST00000578446 NIF3L1Q9GZT8 377 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 XYLT2Q9H1B5 865 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 MARCH5Q9NX47 278 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
USP22-208ENST00000578446 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 CITO14578 2027 aa11.46□□□□□ -0.57
USP22-208ENST00000578446 PTPRSQ13332 1948 aa11.46□□□□□ -0.58
USP22-208ENST00000578446 LAMA2P24043 3122 aaKnown RBP11.45□□□□□ -0.58
USP22-208ENST00000578446 ARHGEF37A1IGU5 675 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 I3L4J1 428 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 HUS1O60921 280 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 FGF18O76093 207 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 ODC1P11926 461 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 PON1P27169 355 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 BMPR1AP36894 532 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 BRCC3P46736 316 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP22-208ENST00000578446 KRT17Q04695 432 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 FUT10Q6P4F1 479 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 ERGIC2Q96RQ1 377 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 MMS19Q96T76 1030 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
USP22-208ENST00000578446 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 VRTNQ9H8Y1 702 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 FAM207AQ9NSI2 230 aaPredicted RBP11.45□□□□□ -0.58
USP22-208ENST00000578446 LAMA3Q16787 3333 aa11.45□□□□□ -0.58
USP22-208ENST00000578446 ANK1P16157 1881 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 A0A1W2PQC6 194 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 CYB561D2O14569 222 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 TEX33O43247 280 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 LRRN2O75325 713 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 SLC9A1P19634 815 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 TBXAS1P24557 533 aaPredicted RBP11.44□□□□□ -0.58
USP22-208ENST00000578446 IGFBP6P24592 240 aaPredicted RBP11.44□□□□□ -0.58
USP22-208ENST00000578446 ASPAP45381 313 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 ERVK-21P61565 698 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 NR1I3Q14994 352 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 FAM171A1Q5VUB5 890 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 LMO3Q8TAP4 145 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 SUSD3Q96L08 255 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 SENP8Q96LD8 212 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 SMYD3Q9H7B4 428 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
USP22-208ENST00000578446 GDAP2Q9NXN4 497 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 PUF60Q9UHX1 559 aaKnown RBP11.44□□□□□ -0.58
USP22-208ENST00000578446 DSEQ9UL01 958 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
USP22-208ENST00000578446 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
USP22-208ENST00000578446 PDCD11Q14690 1871 aaKnown RBP11.43□□□□□ -0.58
USP22-208ENST00000578446 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 C5orf67F2Z3F1 127 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 M0QZQ0 153 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 AP5Z1O43299 807 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 RB1P06400 928 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
USP22-208ENST00000578446 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
USP22-208ENST00000578446 KLK7P49862 253 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 PLCB3Q01970 1234 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 APBA1Q02410 837 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 KCNMA1Q12791 1236 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 CUL2Q13617 745 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 GSE1Q14687 1217 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 KIAA1841Q6NSI8 718 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 CD300LGQ6UXG3 332 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
USP22-208ENST00000578446 SPRED2Q7Z698 418 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 DDX53Q86TM3 631 aaKnown RBP11.43□□□□□ -0.58
USP22-208ENST00000578446 METTL23Q86XA0 190 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 ARHGEF19Q8IW93 802 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 ADGRF2Q8IZF7 708 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 PDCL2Q8N4E4 241 aa11.43□□□□□ -0.58
USP22-208ENST00000578446 TOP6BLQ8N6T0 577 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms