RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TMEM121Q9BTD3 319 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 GTSE1Q9NYZ3 720 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 ZC3H7BQ9UGR2 993 aaKnown RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 TSR3Q9UJK0 312 aaKnown RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 PRPSAP1Q14558 356 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 XKR3Q5GH77 459 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 CAVIN3Q969G5 261 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 ATP6V1E2Q96A05 226 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 C10orf88Q9H8K7 445 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SLC1A1P43005 524 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 NPTX2P47972 431 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 GCLCP48506 637 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 MARCKSL1P49006 195 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 EMC2Q15006 297 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 PPP1R2P3Q6NXS1 205 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 RIT2Q99578 217 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 AGLP35573 1532 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 B2RBV5 119 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ATP5HO75947 161 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ECM1Q16610 540 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 NT5DC3Q86UY8 548 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA20Q8TB22 786 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 FAM111AQ96PZ2 611 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 SLITRK3O94933 977 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 MOCS2O96007 188 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TRIM72Q6ZMU5 477 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 PRUNE1Q86TP1 453 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 RCOR2Q8IZ40 523 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TUBB6Q9BUF5 446 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 BNIP3LO60238 219 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 SHBGP04278 402 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ANXA13P27216 316 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 PBX1P40424 430 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 DLG4P78352 724 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 PTK7Q13308 1070 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 DRP2Q13474 957 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TKFCQ3LXA3 575 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 DSTYKQ6XUX3 929 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TRIM67Q6ZTA4 783 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 BAP1Q92560 729 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-206ENST00000578373 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
ERBB2-206ENST00000578373 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 H3BRJ5 948 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 RARAP10276 462 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 RARGP13631 454 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
ERBB2-206ENST00000578373 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 CEP70Q8NHQ1 597 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ABCF3Q9NUQ8 709 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ADA2Q9NZK5 511 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
ERBB2-206ENST00000578373 STX1BP61266 288 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-206ENST00000578373 SPOUT1Q5T280 376 aaKnown RBP12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ARMC2Q8NEN0 867 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 FEZF2Q8TBJ5 459 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 DNAJC19Q96DA6 116 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 NDE1Q9NXR1 346 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ZFATQ9P243 1243 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 PSMC3IPQ9P2W1 217 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ACTR2P61160 394 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 CUL3Q13618 768 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 AMHR2Q16671 573 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
ERBB2-206ENST00000578373 ENTPD3O75355 529 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 ANP32DO95626 131 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 COPS2P61201 443 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 NDUFAF2Q8N183 169 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
ERBB2-206ENST00000578373 MRPL46Q9H2W6 279 aaKnown RBP12.65□□□□□ -0.38
ERBB2-206ENST00000578373 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
ERBB2-206ENST00000578373 AARSP49588 968 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERBB2-206ENST00000578373 PTENP60484 403 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 EPS15L1Q9UBC2 864 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms