RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 CLLU1OSQ5K130 101 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 DPY19L2P1Q6NXN4 242 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CCDC170Q8IYT3 715 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CXorf38Q8TB03 319 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 SPATA18Q8TC71 538 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 BCO2Q9BYV7 579 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 GDAP2Q9NXN4 497 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 NXF1Q9UBU9 619 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 NUB1Q9Y5A7 615 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 NR2E3Q9Y5X4 410 aa14.23□□□□□ -0.13
CDK5RAP3-205ENST00000577802 BRCA2P51587 3418 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TRIP11Q15643 1979 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CCDC85CA6NKD9 419 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 KPNA7A9QM74 516 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 HUS1O60921 280 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 GFPT2O94808 682 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CST3P01034 146 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 POMCP01189 267 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 FGBP02675 491 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 FGFR1P11362 822 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 USP8P40818 1118 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 ASPAP45381 313 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 APBA1Q02410 837 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 PTK2Q05397 1052 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 GJB7Q6PEY0 223 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 DPH6Q7L8W6 267 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 FAM71AQ8IYT1 594 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TOP6BLQ8N6T0 577 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 GSTCDQ8NEC7 633 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CCDC42Q96M95 316 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 MMS19Q96T76 1030 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TMEM175Q9BSA9 504 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 APOBEC3GQ9HC16 384 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TBC1D13Q9NVG8 400 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 DSEQ9UL01 958 aa14.22□□□□□ -0.13
CDK5RAP3-205ENST00000577802 COL4A6Q14031 1691 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CASTOR2A6NHX0 329 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TMEM189-UBE2V1I3L0A0 370 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 ODC1P11926 461 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 GUCY2FP51841 1108 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 WDR5P61964 334 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CCZ1BP86790 482 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 CCZ1P86791 482 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 SOX4Q06945 474 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 DSC1Q08554 894 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 NAB2Q15742 525 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 PPP1R2P3Q6NXS1 205 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 SCARA5Q6ZMJ2 495 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TMEM86AQ8N2M4 240 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 APPL2Q8NEU8 664 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 DPF3Q92784 378 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 BADQ92934 168 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TATDN2Q93075 761 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 FAM84AQ96KN4 292 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 KREMEN1Q96MU8 473 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 PCDHB4Q9Y5E5 795 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 SNX9Q9Y5X1 595 aa14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDK5RAP3-205ENST00000577802 TTC3P53804 2025 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 TBKBP1A7MCY6 615 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 ZBBXA8MT70 800 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 AKR1B10O60218 316 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 PAEPP09466 180 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 ITGB8P26012 769 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 CLCNKBP51801 687 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 LILRA4P59901 499 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 ARID5AQ03989 594 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 INCA1Q0VD86 236 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 ELAVL2Q12926 359 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 SPA17Q15506 151 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 UPP1Q16831 310 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 DCLRE1AQ6PJP8 1040 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 TMEM270Q6UE05 265 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 DSTYKQ6XUX3 929 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 UNC93AQ86WB7 457 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 METTL23Q86XA0 190 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 CMTR2Q8IYT2 770 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 RBBP8NLQ8NC74 664 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 CASD1Q96PB1 797 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 SLC9A7Q96T83 725 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 GPR88Q9GZN0 384 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 GOLGA2P5Q9HBQ8 144 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 CISHQ9NSE2 258 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 RNF19AQ9NV58 838 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 STK39Q9UEW8 545 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 AJAP1Q9UKB5 411 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 CNTN6Q9UQ52 1028 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
CDK5RAP3-205ENST00000577802 RNF225M0QZC1 329 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-205ENST00000577802 FOXN3O00409 490 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms