RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PTPN2P17706 415 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 GARTP22102 1010 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 ADSSP30520 456 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 LILRA4P59901 499 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 PKP1Q13835 747 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 OVOS1Q6IE37 1185 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 ARMCX5Q6P1M9 558 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 MTSS1LQ765P7 747 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 METTL23Q86XA0 190 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 TCEAL8Q8IYN2 117 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 TMEM130Q8N3G9 435 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 FGF13Q92913 245 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 STRA6Q9BX79 667 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 TRIM9Q9C026 710 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 KBTBD4Q9NVX7 518 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 HCFC1R1Q9NWW0 138 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 RBAKQ9NYW8 714 aaPredicted RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 DSEQ9UL01 958 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 PDCD11Q14690 1871 aaKnown RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 OAZ2O95190 189 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 CFHP08603 1231 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■□□□ 12.5
SF3B3-215ENST00000577085 TFAMQ00059 246 aaKnown RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 E2F4Q16254 413 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 SLC44A3Q8N4M1 653 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 FLCNQ8NFG4 579 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 SENP8Q96LD8 212 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 ZNF512Q96ME7 567 aaPredicted RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 CORO1BQ9BR76 489 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
SF3B3-215ENST00000577085 PCDHA7Q9UN72 937 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 TECTAO75443 2155 aa16.78■□□□□ 0.28
SF3B3-215ENST00000577085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.77■□□□□ 0.28
SF3B3-215ENST00000577085 PPEF2O14830 753 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 RHOP08100 348 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 SRFP11831 508 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 TYMPP19971 482 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 AVPR2P30518 371 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 TAF6P49848 677 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 PLD1Q13393 1074 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 RNF19BQ6ZMZ0 732 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 PDZD4Q76G19 769 aaPredicted RBP16.77■□□□□ 0.28
SF3B3-215ENST00000577085 SIX5Q8N196 739 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 ITFG1Q8TB96 612 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 ING5Q8WYH8 240 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 PGLYRP2Q96PD5 576 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
SF3B3-215ENST00000577085 GOLGA8IPA6NC78 632 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 GOLGA8JA6NMD2 632 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 PIRO00625 290 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 CYB561D2O14569 222 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 ZNF197O14709 1029 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 KIAA0391O15091 583 aaKnown RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 EXTL3O43909 919 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 SEC24AO95486 1093 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 PNPLA4P41247 253 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 PTPN5P54829 565 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 KRT85P78386 507 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 TWF1Q12792 350 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 HTR4Q13639 388 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 SV2CQ496J9 727 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 FAM26FQ5R3K3 315 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 IER5LQ5T953 404 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 ASTLQ6HA08 431 aaPredicted RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 CRELD2Q6UXH1 353 aaPredicted RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 GPD1LQ8N335 351 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
SF3B3-215ENST00000577085 HPS3Q969F9 1004 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 C7orf25Q9BPX7 421 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
SF3B3-215ENST00000577085 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 ANHXE9PGG2 379 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
SF3B3-215ENST00000577085 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 AFMP43652 599 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 ALDH1A3P47895 512 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms