RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TAF1BQ53T94 588 aaPredicted RBP18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 TEKT4Q8WW24 435 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 NAF1Q96HR8 494 aaKnown RBP18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 RANBP17Q9H2T7 1088 aaKnown RBP18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 YY1AP1Q9H869 796 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 AS3MTQ9HBK9 375 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 ZNF277Q9NRM2 450 aaPredicted RBP18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 TCN1P20061 433 aaPredicted RBP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 SMARCA1P28370 1054 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 GCLCP48506 637 aaPredicted RBP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 FNTAP49354 379 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 TRIP10Q15642 601 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 HSP90AA5PQ58FG0 334 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 ACAD10Q6JQN1 1059 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 RNF149Q8NC42 400 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 MASTLQ96GX5 879 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 IRAK4Q9NWZ3 460 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 EIF3DO15371 548 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 EEF1B2P24534 225 aaKnown RBP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 EPHB2P29323 1055 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 CRYMQ14894 314 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 ZFPM1Q8IX07 1006 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 CDHR1Q96JP9 859 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 SH3GL2Q99962 352 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 QTRT2Q9H974 415 aaKnown RBP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 SENP1Q9P0U3 644 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 KLHL8Q9P2G9 620 aaPredicted RBP18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.6
ATPAF1-214ENST00000576409 LDHAP00338 332 aaKnown RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 TMEM119Q4V9L6 283 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 GPAT2Q6NUI2 795 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 RNF135Q8IUD6 432 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 NDUFAF2Q8N183 169 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 MANSC1Q9H8J5 431 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 ADA2Q9NZK5 511 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 FOXD4Q12950 439 aaPredicted RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 ITIH4Q14624 930 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 KDELC2Q7Z4H8 507 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 RSPH3Q86UC2 560 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 SLC25A41Q8N5S1 370 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 TRIM49D1C9J1S8 452 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 SSTR1P30872 391 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 HGSNATQ68CP4 663 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 POLR3CQ9BUI4 534 aaPredicted RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 LRRC4Q9HBW1 653 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 TRAF3IP3Q9Y228 551 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 ATP9BO43861 1147 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 CSDE1O75534 798 aaKnown RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 PDGFRAP16234 1089 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 SDC4P31431 198 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 POU5F1BQ06416 359 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 NPY5RQ15761 445 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 HABP4Q5JVS0 413 aaKnown RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 DCAF15Q66K64 600 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 IRF2BP2Q7Z5L9 587 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 MYLK4Q86YV6 388 aaPredicted RBP18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 RCOR2Q8IZ40 523 aa18.82■□□□□ 0.6
ATPAF1-214ENST00000576409 C11orf63Q6NUN7 778 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 DNAJC18Q9H819 358 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 KIAA1586Q9HCI6 787 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 SLCO1B3Q9NPD5 702 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ASNSD1Q9NWL6 643 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 FEM1BQ9UK73 627 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 DGKIO75912 1065 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ZNF200P98182 395 aaPredicted RBP18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 OCRLQ01968 901 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 DUOXA2Q1HG44 320 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 PCNX4Q63HM2 1172 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 SP8Q8IXZ3 490 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 EMC1Q8N766 993 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 NSUN6Q8TEA1 469 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 RMDN2Q96LZ7 410 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 MRPL46Q9H2W6 279 aaKnown RBP18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ARMCX1Q9P291 453 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 EPS15L1Q9UBC2 864 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 CSADQ9Y600 493 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 CIITAP33076 1130 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 HIC1Q14526 733 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 IL31Q6EBC2 164 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ENOSF1Q7L5Y1 443 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 SH3GL3Q99963 347 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 MXRA8Q9BRK3 442 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 TMEM39BQ9GZU3 492 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 WWP1Q9H0M0 922 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 GANQ9H2C0 597 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ERVK-5Q9HDB9 667 aa18.81■□□□□ 0.6
ATPAF1-214ENST00000576409 ATP6V1B1P15313 513 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 TBXAS1P24557 533 aaPredicted RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 PKN2Q16513 984 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 PRELID2Q8N945 189 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 TAAR1Q96RJ0 339 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 RPS6KC1Q96S38 1066 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 LRRC4BQ9NT99 713 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 MYH10P35580 1976 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 DNM1LO00429 736 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 AP1B1Q10567 949 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms