RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 FOSP01100 380 aaPredicted RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 KRT10P13645 584 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 JUPP14923 745 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 CR2P20023 1033 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 U2AF2P26368 475 aaKnown RBP eCLIP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 SMARCA1P28370 1054 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 AXLP30530 894 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 UCNP55089 124 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 TMPRSS3P57727 454 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 CCDC157Q569K6 752 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 ARHGAP40Q5TG30 622 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 BROXQ5VW32 411 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 NOTUMQ6P988 496 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 ATG14Q6ZNE5 492 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 ZNF589Q86UQ0 364 aaPredicted RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 TMPRSS12Q86WS5 348 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 RHBDD1Q8TEB9 315 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 WHAMMQ8TF30 809 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 EVI5LQ96CN4 794 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 CHFRQ96EP1 664 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 LIN37Q96GY3 246 aaPredicted RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 TMEM176AQ96HP8 235 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 JPH2Q9BR39 696 aaPredicted RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 ZDHHC5Q9C0B5 715 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 CSRNP2Q9H175 543 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 NXF3Q9H4D5 531 aaKnown RBP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 MINDY3Q9H8M7 445 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 ZBTB40Q9NUA8 1239 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 BCCIPQ9P287 314 aaKnown RBP eCLIP8.03□□□□□ -1.12
RAB40B-210ENST00000576148 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 COL4A3BPQ9Y5P4 624 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 LRRK2Q5S007 2527 aa8.03□□□□□ -1.12
RAB40B-210ENST00000576148 PI4KAP42356 2102 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 TSC2P49815 1807 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 ERICH2A1L162 156 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 OTOL1A6NHN0 477 aaPredicted RBP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 TRAPPC3O43617 180 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 AFPP02771 609 aaKnown RBP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 PRKCBP05771 671 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 MYF5P13349 255 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 ZNF33AQ06730 810 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 NFATC3Q12968 1075 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 PCBP1Q15365 356 aaKnown RBP eCLIP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 CRY1Q16526 586 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 ARHGAP15Q53QZ3 475 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 C6orf132Q5T0Z8 1188 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 STXBP5Q5T5C0 1151 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 GPR158Q5T848 1215 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 TPGS2Q68CL5 300 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 SLC36A4Q6YBV0 504 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 TMC8Q8IU68 726 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 DEFB119Q8N690 84 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 TTC9Q92623 222 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 CD101Q93033 1021 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 DDX27Q96GQ7 796 aaKnown RBP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 PGBD1Q96JS3 809 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 LZTS2Q9BRK4 669 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 EBF3Q9H4W6 596 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 FAM124BQ9H5Z6 455 aaPredicted RBP8.02□□□□□ -1.13
RAB40B-210ENST00000576148 HPS4Q9NQG7 708 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 DISC1Q9NRI5 854 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 AHCTF1Q8WYP5 2266 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 FLNCQ14315 2725 aa8.02□□□□□ -1.13
RAB40B-210ENST00000576148 FAM86B1E9PN63 330 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 IFIT3O14879 490 aaKnown RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 B3GAT3O94766 335 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 THP07101 528 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 FAM86B2P0C5J1 330 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 GNSP15586 552 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 TKTP29401 623 aaKnown RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 ACTN2P35609 894 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 HNF1BP35680 557 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 SREBF1P36956 1147 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 CYP4A11Q02928 519 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 UGCGQ16739 394 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 IMMTQ16891 758 aaKnown RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 XKR3Q5GH77 459 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 TRIM68Q6AZZ1 485 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 DHRS13Q6UX07 377 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 PGBD3Q8N328 593 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 CCDC33Q8N5R6 958 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 CTCFLQ8NI51 663 aaPredicted RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 BAHD1Q8TBE0 780 aaPredicted RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 EZH1Q92800 747 aaPredicted RBP8.01□□□□□ -1.13
RAB40B-210ENST00000576148 CPB2Q96IY4 423 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 LGMNQ99538 433 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 SH2D3AQ9BRG2 576 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 ANO3Q9BYT9 981 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 NRSN2Q9GZP1 204 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 ATXN3LQ9H3M9 355 aa8.01□□□□□ -1.13
RAB40B-210ENST00000576148 SUSD2Q9UGT4 822 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms