RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TFDP1Q14186 410 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 CD302Q8IX05 232 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 C1orf54Q8WWF1 131 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 LRRC45Q96CN5 670 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 MS4A4AQ96JQ5 239 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 PCYOX1Q9UHG3 505 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 POLIQ9UNA4 740 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 A0A087WZ62 844 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 GPR25O00155 361 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 PLTPP55058 493 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 FOXR1Q6PIV2 292 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 ZDHHC24Q6UX98 284 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 LRRC31Q6UY01 552 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 EXOC8Q8IYI6 725 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 TRIM11Q96F44 468 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 FMO2Q99518 471 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 FDXACB1Q9BRP7 624 aaPredicted RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 NIF3L1Q9GZT8 377 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 GRHL1Q9NZI5 618 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 MEFVO15553 781 aaPredicted RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 VTNP04004 478 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 COILP38432 576 aaPredicted RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 RPL21P46778 160 aaKnown RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 TAS2R40P59535 323 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 TRPC3Q13507 836 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 PHF13Q86YI8 300 aaPredicted RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 FBXO25Q8TCJ0 367 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 JPH2Q9BR39 696 aaPredicted RBP25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 XYLT2Q9H1B5 865 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 ATP8A1Q9Y2Q0 1164 aa25.19■■□□□ 1.62
NPLOC4-217ENST00000574897 CCL15-CCL14A0A0B4J2E2 113 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 RAP1GAPP47736 663 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 ATP1A2P50993 1020 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 AP3M2P53677 418 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 CCL15Q16663 113 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 TRIM72Q6ZMU5 477 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 C1orf131Q8NDD1 294 aaKnown RBP25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 DDX27Q96GQ7 796 aaKnown RBP25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 CPB2Q96IY4 423 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 USTQ9Y2C2 406 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 DOCK3Q8IZD9 2030 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 PROSCO94903 275 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 GJC1P36383 396 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 RPL7AP62424 266 aaKnown RBP25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 SNX1Q13596 522 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 CYP1B1Q16678 543 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 ZNF699Q32M78 642 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 LIN9Q5TKA1 542 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 CCDC105Q8IYK2 499 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 BRI3BPQ8WY22 251 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 ATG4AQ8WYN0 398 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 TFAP2BQ92481 460 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 CENPHQ9H3R5 247 aa25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 NXF1Q9UBU9 619 aaKnown RBP25.18■■□□□ 1.62
NPLOC4-217ENST00000574897 NFICP08651 508 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 ASPAP45381 313 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 PPARDQ03181 441 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 ZNF844Q08AG5 666 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 SGSM1Q2NKQ1 1148 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 PLEKHA7Q6IQ23 1121 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 LEKR1Q6ZMV7 388 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 MTUS1Q9ULD2 1270 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 KRT19P08727 400 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 LAMC2Q13753 1193 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 KATNBL1Q9H079 304 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 CHST7Q9NS84 486 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 AKT3Q9Y243 479 aa25.17■■□□□ 1.62
NPLOC4-217ENST00000574897 FSCN2O14926 492 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 TLR3O15455 904 aaKnown RBP25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 GH1P01241 217 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 UBAP2Q5T6F2 1119 aaKnown RBP25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 RABEP2Q9H5N1 569 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 RASAL2Q9UJF2 1139 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 TNFSF13BQ9Y275 285 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 CITO14578 2027 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 SNAI1O95863 264 aaPredicted RBP25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 TCF4P15884 667 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 CCNA1P78396 465 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 ORC1Q13415 861 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 AMHR2Q16671 573 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 ANKS1BQ7Z6G8 1248 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 PPP1R13LQ8WUF5 828 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 HEMGNQ9BXL5 484 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 TXLNGYQ9BZA5 131 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 SIX4Q9UIU6 781 aa25.16■■□□□ 1.62
NPLOC4-217ENST00000574897 B4GALT4O60513 344 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 SHOX2O60902 331 aaPredicted RBP25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 MMP8P22894 467 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 ATP6V1G3Q96LB4 118 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 FAM118BQ9BPY3 351 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 C16orf70Q9BSU1 422 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 RPF1Q9H9Y2 349 aaKnown RBP25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 TMBIM4Q9HC24 238 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 KLHL11Q9NVR0 708 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 TNNC2P02585 160 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 SLC1A1P43005 524 aa25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 SSR1P43307 286 aaKnown RBP25.15■■□□□ 1.62
NPLOC4-217ENST00000574897 CDH8P55286 799 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms