RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ABHD2P08910 425 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ZSCAN5DPP0CG00 497 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 KRT10P13645 584 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ACO1P21399 889 aaKnown RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 KRT76Q01546 638 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 HP1BP3Q5SSJ5 553 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ERICH1Q86X53 443 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 EXD1Q8NHP7 514 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 GRAMD1AQ96CP6 724 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 BICD1Q96G01 975 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 RGPD4Q7Z3J3 1758 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 EXOC1LA0A1B0GW35 172 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 UNC5CO95185 931 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 GARTP22102 1010 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 BPIFB4P59827 614 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 NOMO3P69849 1222 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 WDR44Q5JSH3 913 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 LIN9Q5TKA1 542 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 TDRD10Q5VZ19 366 aaKnown RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 RMDN3Q96TC7 470 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 KIF9Q9HAQ2 790 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 TBC1D12O60347 775 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 DIAPH2O60879 1101 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 TCF4P15884 667 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 CCDC15Q0P6D6 951 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 DNAJC3Q13217 504 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 CRYMQ14894 314 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 NAA25Q14CX7 972 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 FASTKD3Q14CZ7 662 aaKnown RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 BRDTQ58F21 947 aaPredicted RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 KAZNQ674X7 775 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 DENND1AQ8TEH3 1009 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 UTP4Q969X6 686 aaKnown RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 PDCD2LQ9BRP1 358 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 MYLK2Q9H1R3 596 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 ETNK1Q9HBU6 452 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 TRPC5Q9UL62 973 aaPredicted RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 TELO2Q9Y4R8 837 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 PTPRJQ12913 1337 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 RAD17O75943 681 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 POTEJP0CG39 1038 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 ETS1P14921 441 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 SKIV2L2P42285 1042 aaKnown RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 PSEN1P49768 467 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 ZACNQ401N2 412 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 PLEKHA7Q6IQ23 1121 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 RSBN1LQ6PCB5 846 aaPredicted RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 RIBC1Q8N443 379 aaPredicted RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 CFAP57Q96MR6 1250 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
SCARF1-206ENST00000573852 KIAA1586Q9HCI6 787 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 GABBR1Q9UBS5 961 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 GRID1Q9ULK0 1009 aa20.2■□□□□ 0.82
SCARF1-206ENST00000573852 WDR81Q562E7 1941 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 POC1B-GALNT4F8VUJ3 575 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 LIASO43766 372 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 STBD1O95210 358 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 VNN1O95497 513 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 C4BPAP04003 597 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 TNNI1P19237 187 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PKN2Q16513 984 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 ABRAQ8N0Z2 381 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 SLCO1B3Q9NPD5 702 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 XPNPEP1Q9NQW7 623 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PXMP2Q9NR77 195 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 ZBTB12Q9Y330 459 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PCDHA10Q9Y5I2 948 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 MAGEB2O15479 319 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 KIF1CO43896 1103 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PIK3CAP42336 1068 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 CLDN10P78369 228 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 MAB21L3Q8N8X9 362 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 ZNF570Q96NI8 536 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 C17orf75Q9HAS0 396 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 SLC38A10Q9HBR0 1119 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 APOBEC3GQ9HC16 384 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 MRPL47Q9HD33 250 aaKnown RBP20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PHTF1Q9UMS5 762 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 STARD13Q9Y3M8 1113 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 PCDHB4Q9Y5E5 795 aa20.19■□□□□ 0.82
SCARF1-206ENST00000573852 DNALI1O14645 258 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-206ENST00000573852 ASNSP08243 561 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 NLRP11P59045 1033 aaKnown RBP20.18■□□□□ 0.82
SCARF1-206ENST00000573852 TMEM270Q6UE05 265 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 FOXP3Q9BZS1 431 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 TRABDQ9H4I3 376 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 CHKBQ9Y259 395 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 EXTL3O43909 919 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 PECAM1P16284 738 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-206ENST00000573852 GNA15P30679 374 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 ACOT2P49753 483 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 POLGP54098 1239 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-206ENST00000573852 SLC8A3P57103 927 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 RPL7AP62424 266 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms