RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 FGFR3P22607 806 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 PAX3P23760 479 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 CCNE1P24864 410 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 LRPAP1P30533 357 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 TFAMQ00059 246 aaKnown RBP14.63□□□□□ -0.07
RPAIN-213ENST00000573577 FKBP3Q00688 224 aaKnown RBP14.63□□□□□ -0.07
RPAIN-213ENST00000573577 ITIH3Q06033 890 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 CYP24A1Q07973 514 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 ADAM9Q13443 819 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 PDXDC1Q6P996 788 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 MLKLQ8NB16 471 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 ANKRD36BP1Q96IX9 119 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 POP1Q99575 1024 aaKnown RBP14.63□□□□□ -0.07
RPAIN-213ENST00000573577 ADAM7Q9H2U9 754 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 PDE11AQ9HCR9 933 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 DACH1Q9UI36 760 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
RPAIN-213ENST00000573577 NUB1Q9Y5A7 615 aa14.63□□□□□ -0.07
RPAIN-213ENST00000573577 TRIP11Q15643 1979 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 BDP1A6H8Y1 2624 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 I3L4J1 428 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 GLUD1P00367 558 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 C1RP00736 705 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 TMEM191BP0C7N4 346 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 RPL17P18621 184 aaKnown RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 BMP6P22004 513 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 PSMC2P35998 433 aaKnown RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 BRCC3P46736 316 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 PAK1Q13153 545 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 CBX2Q14781 532 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 PSMD6Q15008 389 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 PSMD5Q16401 504 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 RARS2Q5T160 578 aaKnown RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 KLHL10Q6JEL2 608 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 CES5AQ6NT32 575 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 FOXR2Q6PJQ5 311 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 WDR49Q8IV35 697 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 GLYCTKQ8IVS8 523 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 GJD3Q8N144 294 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 C12orf76Q8N812 135 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 LNX1Q8TBB1 728 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-213ENST00000573577 MFSD14AQ96MC6 490 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 MKNK1Q9BUB5 465 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 SFXN1Q9H9B4 322 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 CD320Q9NPF0 282 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 MAN1C1Q9NR34 630 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 DPP3Q9NY33 737 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 DPP7Q9UHL4 492 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 NCOR1O75376 2440 aa14.62□□□□□ -0.07
RPAIN-213ENST00000573577 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 TGM5O43548 720 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 TNNC2P02585 160 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 DLATP10515 647 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 EPB41P11171 864 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 KRT13P13646 458 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 TNNI1P19237 187 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 TKTP29401 623 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 AP3M2P53677 418 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 ENPEPQ07075 957 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 DUOXA2Q1HG44 320 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 ANKRD40Q6AI12 368 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 RBM43Q6ZSC3 357 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 PALB2Q86YC2 1186 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 CCDC127Q96BQ5 260 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 CGRRF1Q99675 332 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 CLSTN3Q9BQT9 956 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 INTS13Q9NVM9 706 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 ITGA11Q9UKX5 1188 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 CTNND2Q9UQB3 1225 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 C5orf42Q9H799 3197 aa14.61□□□□□ -0.07
RPAIN-213ENST00000573577 PDCD11Q14690 1871 aaKnown RBP14.61□□□□□ -0.07
RPAIN-213ENST00000573577 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 SYN3O14994 580 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 SLC16A3O15427 465 aaKnown RBP14.6□□□□□ -0.07
RPAIN-213ENST00000573577 FGFR1OPO95684 399 aaKnown RBP14.6□□□□□ -0.07
RPAIN-213ENST00000573577 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
RPAIN-213ENST00000573577 PNPLA4P41247 253 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 GUCY2FP51841 1108 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 NLRP12P59046 1061 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 KLHL40Q2TBA0 621 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 C9orf57Q5W0N0 161 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 LILRA6Q6PI73 481 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 TMC5Q6UXY8 1006 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 ANKS3Q6ZW76 656 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 FAM186BQ8IYM0 893 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 TMEM130Q8N3G9 435 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 TMC2Q8TDI7 906 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 HDAC7Q8WUI4 952 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 SUSD3Q96L08 255 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 RIPOR3Q96MK2 946 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
RPAIN-213ENST00000573577 NECTIN4Q96NY8 510 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms