RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CAPN15O75808 1086 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 URODP06132 367 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ITKQ08881 620 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 SLC18A3Q16572 532 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ADGRF2Q8IZF7 708 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 RABGGTAQ92696 567 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 LPPQ93052 612 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ZNF512Q96ME7 567 aaPredicted RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 ADGRG1Q9Y653 693 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 FAM200BP0CF97 657 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 GBP1P32455 592 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 CTXN3Q4LDR2 81 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 CFAP58Q5T655 872 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 FBXO38Q6PIJ6 1188 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 MMS22LQ6ZRQ5 1243 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 HSPH1Q92598 858 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 TATDN2Q93075 761 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 FGFBP2Q9BYJ0 223 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 CISHQ9NSE2 258 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 FAM105AQ9NUU6 356 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 CALCOCO1Q9P1Z2 691 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 TXNDC16Q9P2K2 825 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 RTN2O75298 545 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 KRT3P12035 628 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 ATICP31939 592 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 ARL2P36404 184 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 TNFSF9P41273 254 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 TLE2Q04725 743 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 NME3Q13232 169 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 RWDD4Q6NW29 188 aaKnown RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 MAMDC4Q6UXC1 1216 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 TAB3Q8N5C8 712 aaPredicted RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 MAGOHBQ96A72 148 aaKnown RBP10.73□□□□□ -0.69
SMG6-213ENST00000573166 NCAPGQ9BPX3 1015 aa10.73□□□□□ -0.69
SMG6-213ENST00000573166 LRRIQ3A6PVS8 624 aaPredicted RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 TGFB1I1O43294 461 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 RGS20O76081 388 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 C22orf31O95567 290 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 MOCS2O96007 188 aaPredicted RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 EDNRBP24530 442 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 WHAMMP3Q1A5X7 153 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 TAPT1Q6NXT6 567 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 LRRC8DQ7L1W4 858 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 NT5DC4Q86YG4 428 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 DYDC1Q8WWB3 177 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 ARHGAP28Q9P2N2 729 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 FAM169AQ9Y6X4 670 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 GTPBP10A4D1E9 387 aaKnown RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 PALMO75781 387 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 ZRANB2O95218 330 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMG6-213ENST00000573166 TUBBP07437 444 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 RAP1GAPP47736 663 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 PPP2R5DQ14738 602 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 GOLGA7BQ2TAP0 167 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 PARVAQ9NVD7 372 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 PASKQ96RG2 1323 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 A0A1W2PQJ5 194 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 HSF2BPO75031 334 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 ADRB2P07550 413 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 RALAP11233 206 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 ALDH1A3P47895 512 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 GALCP54803 685 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 RWDD2BP57060 319 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 TRIM32Q13049 653 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 PPP2R5EQ16537 467 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 CCDC62Q6P9F0 684 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 RFFLQ8WZ73 363 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
SMG6-213ENST00000573166 ENTPD7Q9NQZ7 604 aa10.72□□□□□ -0.69
SMG6-213ENST00000573166 COL4A1P02462 1669 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 LGR5O75473 907 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 GRAP2O75791 330 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 MYBL1P10243 752 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 CDK17Q00537 523 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 PURAQ00577 322 aaKnown RBP10.71□□□□□ -0.69
SMG6-213ENST00000573166 YWHAHQ04917 246 aaPredicted RBP10.71□□□□□ -0.69
SMG6-213ENST00000573166 PPP3CAQ08209 521 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 CCDC14Q49A88 953 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 ZNF280DQ6N043 979 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 CASC4Q6P4E1 433 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 PPP1R21Q6ZMI0 780 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 LRRC55Q6ZSA7 311 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-213ENST00000573166 SPATA20Q8TB22 786 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 CYFIP2Q96F07 1278 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 SIK2Q9H0K1 926 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms