RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 CASP5P51878 434 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 SOX4Q06945 474 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 NOLC1Q14978 699 aaKnown RBP eCLIP12.84□□□□□ -0.35
NDE1-206ENST00000572967 NFIL3Q16649 462 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 SEZ6Q53EL9 994 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 ZC2HC1CQ53FD0 456 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 CENPPQ6IPU0 288 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 ARMCX5Q6P1M9 558 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 MPZL3Q6UWV2 235 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 OTOP3Q7RTS5 596 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 USP37Q86T82 979 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 C12orf56Q8IXR9 622 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 SMYD4Q8IYR2 804 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 ZDHHC14Q8IZN3 488 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 TCHPQ9BT92 498 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 PIDD1Q9HB75 910 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 KIAA1586Q9HCI6 787 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 FBXW11Q9UKB1 542 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 ABLIM1O14639 778 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 IKBKBO14920 756 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 CETN3O15182 167 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 CLDN3O15551 220 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 ADAM12O43184 909 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 B3GAT3O94766 335 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 GNA14O95837 355 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 BMP6P22004 513 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 PROZP22891 400 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 TKTP29401 623 aaKnown RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 BRCC3P46736 316 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 NHLH1Q02575 133 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 SPAG1Q07617 926 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 ELAVL2Q12926 359 aaKnown RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 IER5LQ5T953 404 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 LIN9Q5TKA1 542 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 BMP8AQ7Z5Y6 402 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 UBALD2Q8IYN6 164 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 TMEM130Q8N3G9 435 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 CSGALNACT2Q8N6G5 542 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 TMEM174Q8WUU8 243 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 ZBTB45Q96K62 511 aaPredicted RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 CEP63Q96MT8 703 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 KCTD10Q9H3F6 313 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
NDE1-206ENST00000572967 DPP7Q9UHL4 492 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 FRMD4BQ9Y2L6 1034 aa12.83□□□□□ -0.36
NDE1-206ENST00000572967 SMIM28A0A1B0GU29 152 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 PODXLO00592 558 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 SLC16A3O15427 465 aaKnown RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 NR3C1P04150 777 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 C8AP07357 584 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 TPM2P07951 284 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 MCF2P10911 925 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 SLC9A9Q8IVB4 645 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 ST13P5Q8NFI4 369 aaPredicted RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 POMGNT1Q8WZA1 660 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 C18orf25Q96B23 403 aaPredicted RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 MYADMQ96S97 322 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 CLSTN3Q9BQT9 956 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 MKNK1Q9BUB5 465 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 WDR6Q9NNW5 1121 aaKnown RBP12.82□□□□□ -0.36
NDE1-206ENST00000572967 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
NDE1-206ENST00000572967 COL4A3Q01955 1670 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 CCL16O15467 120 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 MEFVO15553 781 aaPredicted RBP12.81□□□□□ -0.36
NDE1-206ENST00000572967 EXOC3O60645 756 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 ZMYND10O75800 440 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 CXCL8P10145 99 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
NDE1-206ENST00000572967 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
NDE1-206ENST00000572967 NR2F2P24468 414 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
NDE1-206ENST00000572967 UPP1Q16831 310 aa12.81□□□□□ -0.36
NDE1-206ENST00000572967 ZCWPW2Q504Y3 356 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms