RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-208	ENST00000572351	NOP14	P78316	857 aa	Known RBP	10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	FANCC	Q00597	558 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	GPM6B	Q13491	265 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	BMS1	Q14692	1282 aa	Known RBP	10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	EXOC3L4	Q17RC7	722 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	WDR72	Q3MJ13	1102 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	ZNF667	Q5HYK9	610 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	FAM171A1	Q5VUB5	890 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	FUT10	Q6P4F1	479 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	METTL23	Q86XA0	190 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	GAS2L3	Q86XJ1	694 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	TAF4B	Q92750	862 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	NT5C1B	Q96P26	610 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	MMS19	Q96T76	1030 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	CRACR2A	Q9BSW2	395 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	PI4K2A	Q9BTU6	479 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	STK39	Q9UEW8	545 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	MYH11	P35749	1972 aa		10.15	□□□□□ -0.78
NPLOC4-208	ENST00000572351	CYB561D2	O14569	222 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SPTLC1	O15269	473 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PMM2	O15305	246 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	CBFA2T2	O43439	604 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LPXN	O60711	386 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	HUS1	O60921	280 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ASS1	P00966	412 aa	Known RBP	10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	UROD	P06132	367 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LINC00271	P0C7V0	271 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	UBASH3A	P57075	661 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PLCB3	Q01970	1234 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LRMP	Q12912	555 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TIGD5	Q53EQ6	642 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	MIIP	Q5JXC2	388 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ZNF697	Q5TEC3	545 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SPOPL	Q6IQ16	392 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SCARA5	Q6ZMJ2	495 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SPRED2	Q7Z698	418 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	DDX53	Q86TM3	631 aa	Known RBP	10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	CEP57	Q86XR8	500 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	EHBP1	Q8NDI1	1231 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	APPL2	Q8NEU8	664 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	CXorf38	Q8TB03	319 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	MICAL1	Q8TDZ2	1067 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SEMA4D	Q92854	862 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SENP8	Q96LD8	212 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	INTS2	Q9H0H0	1204 aa	Known RBP	10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ZNF576	Q9H609	170 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ALG13	Q9NP73	1137 aa	Known RBP	10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ENTPD7	Q9NQZ7	604 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	IFNK	Q9P0W0	207 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	DSE	Q9UL01	958 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	COQ4	Q9Y3A0	265 aa		10.14	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TET1	Q8NFU7	2136 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	COL4A6	Q14031	1691 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TMEM265	A0A087WTH1	108 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	GTPBP10	A4D1E9	387 aa	Known RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LRRC10B	A6NIK2	292 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	C5orf67	F2Z3F1	127 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	C2CD2L	O14523	706 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SYN3	O14994	580 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	STAU1	O95793	577 aa	Known RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SOD2	P04179	222 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	IGFBP6	P24592	240 aa	Predicted RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	GLUD2	P49448	558 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	AARS	P49588	968 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	NUBP1	P53384	320 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	UBE3A	Q05086	875 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	USP41	Q3LFD5	358 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SCARA3	Q6AZY7	606 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	POTEH	Q6S545	545 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	APTX	Q7Z2E3	356 aa	Known RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TMC7	Q7Z402	723 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	VPS52	Q8N1B4	723 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PPM1K	Q8N3J5	372 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TOP6BL	Q8N6T0	577 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	ELMO3	Q96BJ8	720 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SUSD3	Q96L08	255 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	B3GALT6	Q96L58	329 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TCF25	Q9BQ70	676 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TTPAL	Q9BTX7	342 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	HERC2P3	Q9BVR0	1158 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LSM14B	Q9BX40	385 aa	Known RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	GPR62	Q9BZJ7	368 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	NIF3L1	Q9GZT8	377 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	XYLT2	Q9H1B5	865 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	VRTN	Q9H8Y1	702 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PCDHB8	Q9UN66	801 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	POLI	Q9UNA4	740 aa		10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.13	□□□□□ -0.79
NPLOC4-208	ENST00000572351		A0A1B0GTH6	734 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	GOLGA6L3	A6NEY3	463 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351		H3BNC9	293 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351		M0QZQ0	153 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SOX1	O00570	391 aa	Predicted RBP	10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	LRRN2	O75325	713 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	SLC9A1	P19634	815 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TBXAS1	P24557	533 aa	Predicted RBP	10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	PON1	P27169	355 aa		10.12	□□□□□ -0.79
NPLOC4-208	ENST00000572351	TKT	P29401	623 aa	Known RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms