RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 LRWD1Q9UFC0 647 aa20.97■□□□□ 0.95
NUP88-203ENST00000572019 AFF4Q9UHB7 1163 aaKnown RBP20.97■□□□□ 0.95
NUP88-203ENST00000572019 YIPF1Q9Y548 306 aa20.97■□□□□ 0.95
NUP88-203ENST00000572019 SPAG17Q6Q759 2223 aa20.97■□□□□ 0.95
NUP88-203ENST00000572019 EML5Q05BV3 1969 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 SLC38A8A6NNN8 435 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 MCF2P10911 925 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 MUTP22033 750 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 RPL9P32969 192 aaKnown RBP20.96■□□□□ 0.95
NUP88-203ENST00000572019 TOB1P50616 345 aaPredicted RBP20.96■□□□□ 0.95
NUP88-203ENST00000572019 ZNF280DQ6N043 979 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 TXNDC11Q6PKC3 985 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 TTC9BQ8N6N2 239 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 TTC8Q8TAM2 541 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 SNX29Q8TEQ0 813 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 C8orf76Q96K31 380 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 ZNF512Q96ME7 567 aaPredicted RBP20.96■□□□□ 0.95
NUP88-203ENST00000572019 RTKNQ9BST9 563 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 TRPV4Q9HBA0 871 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 KMT5AQ9NQR1 393 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 GREB1Q4ZG55 1949 aa20.96■□□□□ 0.95
NUP88-203ENST00000572019 A0A1W2PRU2 124 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 K7ESF4 209 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 ZNF263O14978 683 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 GDF9O60383 454 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 CPB1P15086 417 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 GUCY2FP51841 1108 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 CDR1P51861 262 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 DMP1Q13316 513 aaPredicted RBP20.95■□□□□ 0.94
NUP88-203ENST00000572019 SAFBQ15424 915 aaKnown RBP eCLIP20.95■□□□□ 0.94
NUP88-203ENST00000572019 IQCEQ6IPM2 695 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 RINT1Q6NUQ1 792 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 C1orf186Q6ZWK4 172 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 APBB1IPQ7Z5R6 666 aaPredicted RBP20.95■□□□□ 0.94
NUP88-203ENST00000572019 MFSD6LQ8IWD5 586 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 CCDC83Q8IWF9 413 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 IGSF22Q8N9C0 903 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 BEST2Q8NFU1 509 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 ZFYVE19Q96K21 471 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 TCHPQ9BT92 498 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 MMTAG2Q9BU76 263 aaKnown RBP20.95■□□□□ 0.94
NUP88-203ENST00000572019 MKNK1Q9BUB5 465 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 FOXP1Q9H334 677 aaPredicted RBP20.95■□□□□ 0.94
NUP88-203ENST00000572019 ASAH2Q9NR71 780 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 ANKFY1Q9P2R3 1169 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 PCDHB8Q9UN66 801 aa20.95■□□□□ 0.94
NUP88-203ENST00000572019 DENND4CQ5VZ89 1909 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 SCN1AP35498 2009 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.94■□□□□ 0.94
NUP88-203ENST00000572019 SOAT2O75908 522 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 CXCL8P10145 99 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 SDHBP21912 280 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 CXCL12P48061 93 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 CCR3P51677 355 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 RAD51AP2Q09MP3 1159 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 HEATR6Q6AI08 1181 aaKnown RBP20.94■□□□□ 0.94
NUP88-203ENST00000572019 LAIR1Q6GTX8 287 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 CELF5Q8N6W0 485 aaKnown RBP20.94■□□□□ 0.94
NUP88-203ENST00000572019 DEPDC1BQ8WUY9 529 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 PCDHB6Q9Y5E3 794 aa20.94■□□□□ 0.94
NUP88-203ENST00000572019 USP24Q9UPU5 2620 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 PPEF2O14830 753 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 ADRB1P08588 477 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 PTGDRQ13258 359 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 ORC2Q13416 577 aaPredicted RBP20.93■□□□□ 0.94
NUP88-203ENST00000572019 SIM2Q14190 667 aaPredicted RBP20.93■□□□□ 0.94
NUP88-203ENST00000572019 ELMOD1Q8N336 334 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 TMEM209Q96SK2 561 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 SLITRK6Q9H5Y7 841 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 SEMA4GQ9NTN9 838 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 SLC27A5Q9Y2P5 690 aa20.93■□□□□ 0.94
NUP88-203ENST00000572019 M0QZQ0 153 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 SLC30A4O14863 429 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 TNFSF9P41273 254 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 NRLP54845 237 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 DUSP4Q13115 394 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 PPM1JQ5JR12 505 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 GAREM2Q75VX8 874 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 FBXO18Q8NFZ0 1043 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 GTSE1Q9NYZ3 720 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 RAB23Q9ULC3 237 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 ZFHX4Q86UP3 3567 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 OBSL1O75147 1896 aa20.92■□□□□ 0.94
NUP88-203ENST00000572019 OAZ2O95190 189 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 SEC24BO95487 1268 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 RETP07949 1114 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 FCHO2Q0JRZ9 810 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 ZNF638Q14966 1978 aaKnown RBP20.91■□□□□ 0.94
NUP88-203ENST00000572019 NOLC1Q14978 699 aaKnown RBP eCLIP20.91■□□□□ 0.94
NUP88-203ENST00000572019 PRR23CQ6ZRP0 262 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 ARID3BQ8IVW6 561 aaPredicted RBP20.91■□□□□ 0.94
NUP88-203ENST00000572019 SPEM1Q8N4L4 309 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 ATAD1Q8NBU5 361 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 TMEM161BQ8NDZ6 487 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 APPL2Q8NEU8 664 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 IER2Q9BTL4 223 aa20.91■□□□□ 0.94
NUP88-203ENST00000572019 NPHP3-ACAD11A0A0J9YXS1 232 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 SPECC1L-ADORA2AF8WAN1 911 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 CTHP32929 405 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 AARSP49588 968 aaKnown RBP eCLIP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms