RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 UBQLN1Q9UMX0 589 aaKnown RBP20.76■□□□□ 0.91
RPAIN-210ENST00000571613 AGAP1Q9UPQ3 857 aa20.76■□□□□ 0.91
RPAIN-210ENST00000571613 MYH10P35580 1976 aa20.76■□□□□ 0.91
RPAIN-210ENST00000571613 TRIP12Q14669 1992 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 THAP12O43422 761 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 RPS6KA5O75582 802 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 CD4P01730 458 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 CYP1A2P05177 515 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 PAEPP09466 180 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 POLR2BP30876 1174 aaKnown RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 NSFP46459 744 aaKnown RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 CENPCQ03188 943 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 ITIH3Q06033 890 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 ERCC6LQ2NKX8 1250 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 ALKAL1Q6UXT8 129 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 DAAM2Q86T65 1068 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 FAM228AQ86W67 206 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 GPR161Q8N6U8 529 aaKnown RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 ANKRD7Q92527 254 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF518BQ9C0D4 1074 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 AVENQ9NQS1 362 aaPredicted RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 PUF60Q9UHX1 559 aaKnown RBP20.75■□□□□ 0.91
RPAIN-210ENST00000571613 AMFRQ9UKV5 643 aa20.75■□□□□ 0.91
RPAIN-210ENST00000571613 GPR182O15218 404 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 MED7O43513 233 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 CAND2O75155 1236 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 RECQL4O94761 1208 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 LSM8O95777 96 aaKnown RBP20.74■□□□□ 0.91
RPAIN-210ENST00000571613 FTCDO95954 541 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 MYCNP04198 464 aaPredicted RBP20.74■□□□□ 0.91
RPAIN-210ENST00000571613 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
RPAIN-210ENST00000571613 PTK7Q13308 1070 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 ZBTB6Q15916 424 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 PTGISQ16647 500 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 CCDC181Q5TID7 509 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 LRRC52Q8N7C0 313 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF606Q8WXB4 792 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 PBKQ96KB5 322 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 GLT1D1Q96MS3 346 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 SENP6Q9GZR1 1112 aaPredicted RBP20.74■□□□□ 0.91
RPAIN-210ENST00000571613 NOC2LQ9Y3T9 749 aaKnown RBP20.74■□□□□ 0.91
RPAIN-210ENST00000571613 CEP83Q9Y592 693 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 CITO14578 2027 aa20.74■□□□□ 0.91
RPAIN-210ENST00000571613 TLR3O15455 904 aaKnown RBP20.73■□□□□ 0.91
RPAIN-210ENST00000571613 KIF4AO95239 1232 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 TUBBP07437 444 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 CD58P19256 250 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 TNNC1P63316 161 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ITGA7Q13683 1181 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 CFAP221Q4G0U5 840 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 XKR4Q5GH76 650 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 UBXN11Q5T124 520 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 TWF2Q6IBS0 349 aaKnown RBP20.73■□□□□ 0.91
RPAIN-210ENST00000571613 C11orf63Q6NUN7 778 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF572Q7Z3I7 529 aaPredicted RBP20.73■□□□□ 0.91
RPAIN-210ENST00000571613 DNAAF5Q86Y56 855 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF653Q96CK0 615 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ARHGEF26Q96DR7 871 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 SRGAP2O75044 1071 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 INHAP05111 366 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 WEE2P0C1S8 567 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 KCNE1P15382 129 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 CYP3A5P20815 502 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ACLYP53396 1101 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ELF2Q15723 593 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 LIN9Q5TKA1 542 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 CREG2Q8IUH2 290 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 MCOLN2Q8IZK6 566 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ARRDC4Q8NCT1 418 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 LRRN4CLQ8ND94 238 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 SELENOOQ9BVL4 669 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 SEZ6LQ9BYH1 1024 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 NXF3Q9H4D5 531 aaKnown RBP20.73■□□□□ 0.91
RPAIN-210ENST00000571613 ABCB6Q9NP58 842 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 OSGEPQ9NPF4 335 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 PCDHGC3Q9UN70 934 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 NOD1Q9Y239 953 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 RALGAPA2Q2PPJ7 1873 aa20.73■□□□□ 0.91
RPAIN-210ENST00000571613 BUB1BO60566 1050 aaPredicted RBP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 GRK4P32298 578 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 MGAT3Q09327 533 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 TEX35Q5T0J7 233 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 PHF13Q86YI8 300 aaPredicted RBP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 TSC1Q92574 1164 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 CNOT8Q9UFF9 292 aaKnown RBP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 PARP2Q9UGN5 583 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 ST3GAL5Q9UNP4 418 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 IPPQ9Y573 584 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 SQORQ9Y6N5 450 aa20.72■□□□□ 0.91
RPAIN-210ENST00000571613 V9GYY5 206 aaPredicted RBP20.72■□□□□ 0.91
RPAIN-210ENST00000571613 NCK2O43639 380 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 ZSCAN20P17040 1043 aaPredicted RBP20.71■□□□□ 0.91
RPAIN-210ENST00000571613 PNPLA4P41247 253 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 NOMO3P69849 1222 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 C1QBPQ07021 282 aaKnown RBP20.71■□□□□ 0.91
RPAIN-210ENST00000571613 SCARA5Q6ZMJ2 495 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 NT5DC3Q86UY8 548 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms