RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CEP131Q9UPN4 1083 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 AK5Q9Y6K8 562 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 CNTNAP2Q9UHC6 1331 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 HELZP42694 1942 aaKnown RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 A0A087WZ62 844 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 OTOL1A6NHN0 477 aaPredicted RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 TADA2AO75478 443 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 NDUFV2P19404 249 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 KIF5BP33176 963 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 SCNN1GP51170 649 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 GRSF1Q12849 480 aaKnown RBP eCLIP7.74□□□□□ -1.17
CHD3-213ENST00000571249 SLC14A1Q13336 389 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 TEAD2Q15562 447 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 SMAD1Q15797 465 aaKnown RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 PSMD5Q16401 504 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 DUOXA1Q1HG43 343 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 IFIT1BQ5T764 474 aaKnown RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 MIS18BP1Q6P0N0 1132 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 TMEM92Q6UXU6 159 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 SYT13Q7L8C5 426 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 CATSPER4Q7RTX7 472 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 C11orf74Q86VG3 221 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 TTC30AQ86WT1 665 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 GALNT15Q8N3T1 639 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 TTC13Q8NBP0 860 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 HASPINQ8TF76 798 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 EZH1Q92800 747 aaPredicted RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 NAF1Q96HR8 494 aaKnown RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 GAD1Q99259 594 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 KIF2CQ99661 725 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 MXRA8Q9BRK3 442 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 PAAF1Q9BRP4 392 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 AGO4Q9HCK5 861 aaKnown RBP7.74□□□□□ -1.17
CHD3-213ENST00000571249 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 ADAM28Q9UKQ2 775 aa7.74□□□□□ -1.17
CHD3-213ENST00000571249 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 TNRC6BQ9UPQ9 1833 aaKnown RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 ADGRG4Q8IZF6 3080 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 CLEC18AA5D8T8 446 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 AFPP02771 609 aaKnown RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 RAB33AQ14088 237 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 UBE2SQ16763 222 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 PREPLQ4J6C6 727 aaPredicted RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 FAM171A1Q5VUB5 890 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 PEAR1Q5VY43 1037 aaPredicted RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 KIAA1614Q5VZ46 1190 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 LYSMD4Q5XG99 296 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 DHRS13Q6UX07 377 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 CLEC18BQ6UXF7 455 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 EXD3Q8N9H8 876 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 CLEC18CQ8NCF0 446 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 TSTD1Q8NFU3 115 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 SNIP1Q8TAD8 396 aaKnown RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 PANK1Q8TE04 598 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 BAP1Q92560 729 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 LPIN3Q9BQK8 851 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 TTPALQ9BTX7 342 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 LY9Q9HBG7 655 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 PCDHA6Q9UN73 950 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 PCDHA8Q9Y5H6 950 aa7.73□□□□□ -1.17
CHD3-213ENST00000571249 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
CHD3-213ENST00000571249 ABCA2Q9BZC7 2435 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 CELSR1Q9NYQ6 3014 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 ARL5CA6NH57 179 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 ZNF197O14709 1029 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 TRDMT1O14717 391 aaKnown RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 SUV39H1O43463 412 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 ITGA4P13612 1032 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 IGFBP6P24592 240 aaPredicted RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 ELAVL4P26378 380 aaKnown RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 ZNF76P36508 570 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 MLH1P40692 756 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 GALK1P51570 392 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 UBXN11Q5T124 520 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 STXBP5Q5T5C0 1151 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 ATG14Q6ZNE5 492 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 PDZD4Q76G19 769 aaPredicted RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 MDGA1Q8NFP4 955 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 OLIG1Q8TAK6 271 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 BAHD1Q8TBE0 780 aaPredicted RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 TSC1Q92574 1164 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 FGF11Q92914 225 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 UBAC1Q9BSL1 405 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 INO80BQ9C086 356 aaPredicted RBP7.72□□□□□ -1.17
CHD3-213ENST00000571249 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 PSTPIP2Q9H939 334 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 IL21RQ9HBE5 538 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 HELLSQ9NRZ9 838 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 GABBR1Q9UBS5 961 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 PDZD2O15018 2839 aa7.72□□□□□ -1.17
CHD3-213ENST00000571249 ZMYM6O95789 1325 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms