RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 CAMKK1Q8N5S9 505 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 DAGLBQ8NCG7 672 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 DEFB124Q8NES8 71 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 TMEM209Q96SK2 561 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 MKNK1Q9BUB5 465 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 ANKEF1Q9NU02 776 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 KLK13Q9UKR3 277 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 CELSR3Q9NYQ7 3312 aa11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-202ENST00000570380 PATE3B3GLJ2 98 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 H7C4K7 107 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 SYN3O14994 580 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 KHNYNO15037 678 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 ATG13O75143 517 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 LYPLA2O95372 231 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 CAPNS1P04632 268 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 HMGB1P09429 215 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 RARRES1P49788 294 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 ELF2Q15723 593 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 CTXN3Q4LDR2 81 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 C19orf48Q6RUI8 117 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 MAEAQ7L5Y9 396 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 TMC8Q8IU68 726 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 HHIPQ96QV1 700 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 NCOA5Q9HCD5 579 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 AFF4Q9UHB7 1163 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 ANK1P16157 1881 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 BPTFQ12830 3046 aa11.48□□□□□ -0.57
CTDNEP1-202ENST00000570380 PLXNB3Q9ULL4 1909 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 SMIM28A0A1B0GU29 152 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 VNN2O95498 520 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 CCT2P78371 535 aaKnown RBP11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 KRT32Q14532 448 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 UAP1L1Q3KQV9 507 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 ITPRIPL2Q3MIP1 535 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 TMEM196Q5HYL7 178 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 KRT25Q7Z3Z0 450 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 NEK8Q86SG6 692 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 PDZD3Q86UT5 571 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 ZBTB8OSQ8IWT0 167 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 PIGOQ8TEQ8 1089 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 BSNDQ8WZ55 320 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 CHFRQ96EP1 664 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 DNAJC25Q9H1X3 360 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 YIPF1Q9Y548 306 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 GON4LQ3T8J9 2241 aa11.47□□□□□ -0.57
CTDNEP1-202ENST00000570380 OBSL1O75147 1896 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 ACKR2O00590 384 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 PODXLO00592 558 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 DPYSL4O14531 572 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 MARCH6O60337 910 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 CCNT1O60563 726 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 RNF40O75150 1001 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 LIG1P18858 919 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 IRX4P78413 519 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 MAPK6Q16659 721 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 GALNT17Q6IS24 598 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 GAREM2Q75VX8 874 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 BEST2Q8NFU1 509 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 BPIFB1Q8TDL5 484 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 CRISPLD1Q9H336 500 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 FBRSL1Q9HCM7 1045 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 OBP2AQ9NY56 170 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 INVSQ9Y283 1065 aa11.46□□□□□ -0.57
CTDNEP1-202ENST00000570380 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 SPAARA0A1B0GVQ0 90 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 FAM221BA6H8Z2 402 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 OTOL1A6NHN0 477 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 TRDMT1O14717 391 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 PRAMEF12O95522 483 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 EGFP01133 1207 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 CPB1P15086 417 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 PDIA3P30101 505 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 GBP1P32455 592 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 SSRP1Q08945 709 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms