RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 APEX2Q9UBZ4 518 aa13.25□□□□□ -0.29
NUP93-220ENST00000569842 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 NOL4O94818 638 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
NUP93-220ENST00000569842 MYOGP15173 224 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 TRIM21P19474 475 aaKnown RBP13.24□□□□□ -0.29
NUP93-220ENST00000569842 SV2CQ496J9 727 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 SPECC1LQ69YQ0 1117 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 CD300LGQ6UXG3 332 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 TMC6Q7Z403 805 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
NUP93-220ENST00000569842 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 UBE2TQ9NPD8 197 aaPredicted RBP13.24□□□□□ -0.29
NUP93-220ENST00000569842 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 SNX9Q9Y5X1 595 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 SCARA5Q6ZMJ2 495 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 NIF3L1Q9GZT8 377 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 GANQ9H2C0 597 aa13.24□□□□□ -0.29
NUP93-220ENST00000569842 ITIH6Q6UXX5 1313 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 I3L4J1 428 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 TADA2AO75478 443 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 UCHL3P15374 230 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 LAG3P18627 525 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 BRCC3P46736 316 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 POLR2FP61218 127 aaKnown RBP13.23□□□□□ -0.29
NUP93-220ENST00000569842 TNNC1P63316 161 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
NUP93-220ENST00000569842 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 TDHQ8IZJ6 230 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 KAT5Q92993 513 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 ARID3AQ99856 593 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 FHOD1Q9Y613 1164 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 SCN1AP35498 2009 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 TMEM189-UBE2V1I3L0A0 370 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
NUP93-220ENST00000569842 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 DNAJC12Q9UKB3 198 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 AJAP1Q9UKB5 411 aaPredicted RBP13.23□□□□□ -0.29
NUP93-220ENST00000569842 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
NUP93-220ENST00000569842 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.22□□□□□ -0.29
NUP93-220ENST00000569842 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.22□□□□□ -0.29
NUP93-220ENST00000569842 P4HA1P13674 534 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 CDC25BP30305 580 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 ASPAP45381 313 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
NUP93-220ENST00000569842 CUL2Q13617 745 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 DSTYKQ6XUX3 929 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 BCL7CQ8WUZ0 217 aaPredicted RBP13.22□□□□□ -0.29
NUP93-220ENST00000569842 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 NLRC4Q9NPP4 1024 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 GDAP2Q9NXN4 497 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■□□□□ 9.2
NUP93-220ENST00000569842 CYB561D2O14569 222 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 WEE2P0C1S8 567 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 LINC00271P0C7V0 271 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 GCNT1Q02742 428 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 ARHGAP44Q17R89 818 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
NUP93-220ENST00000569842 KREMEN1Q96MU8 473 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 AAASQ9NRG9 546 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
NUP93-220ENST00000569842 LINC01553A4QN01 128 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 HUS1O60921 280 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 CA3P07451 260 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 TBXAS1P24557 533 aaPredicted RBP13.21□□□□□ -0.29
NUP93-220ENST00000569842 PBX2P40425 430 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 RAP1GAPP47736 663 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 MFAP3P55082 362 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 CDH8P55286 799 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
NUP93-220ENST00000569842 TTYH3Q9C0H2 523 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 YBX2Q9Y2T7 364 aaKnown RBP13.21□□□□□ -0.29
NUP93-220ENST00000569842 PCDHB12Q9Y5F1 795 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 ARHGEF15O94989 841 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 GYPCP04921 128 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 PAX3P23760 479 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 SOWAHAQ2M3V2 549 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
NUP93-220ENST00000569842 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 SLC39A11Q8N1S5 342 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
NUP93-220ENST00000569842 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms