RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 BUB1BO60566 1050 aaPredicted RBP24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 FKTNO75072 461 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 MTA2O94776 668 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CYP1A2P05177 515 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CTAGE8P0CG41 777 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CD58P19256 250 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 YARSP54577 528 aaKnown RBP24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 MGAT3Q09327 533 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 WDR72Q3MJ13 1102 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 TRIM72Q6ZMU5 477 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CTAGE6Q86UF2 777 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CTAGE4Q8IX94 777 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 GOLGA1Q92805 767 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 CALR3Q96L12 384 aaKnown RBP24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 MMS19Q96T76 1030 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 ABCB6Q9NP58 842 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 NXF1Q9UBU9 619 aaKnown RBP24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 GTF3C4Q9UKN8 822 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 STXBP5LQ9Y2K9 1186 aa24.08■■□□□ 1.45
VCPKMT-205ENST00000569518 PDE2AO00408 941 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CHRNA1P02708 482 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 MYCNP04198 464 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CFHP08603 1231 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 YWHAEP62258 255 aaKnown RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 RBP5P82980 135 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CENPCQ03188 943 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CKAP4Q07065 602 aaKnown RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 RNF180Q86T96 592 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 SYCE1Q8N0S2 351 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CAPZA3Q96KX2 299 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 SAGE1Q9NXZ1 904 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 AGAP1Q9UPQ3 857 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 CABYRO75952 493 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 INHAP05111 366 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 YY1P25490 414 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 XKR4Q5GH76 650 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 ZNF572Q7Z3I7 529 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 ZNF296Q8WUU4 475 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 HPDLQ96IR7 371 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 SDCBP2Q9H190 292 aa24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 PACSIN2Q9UNF0 486 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-205ENST00000569518 ACLYP53396 1101 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 TEX35Q5T0J7 233 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 DAAM2Q86T65 1068 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 NT5DC3Q86UY8 548 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 SMG8Q8ND04 991 aaKnown RBP24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 SLAIN1Q8ND83 568 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 ZNF606Q8WXB4 792 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 RABGGTAQ92696 567 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 PSMB7Q99436 277 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 ZSWIM1Q9BR11 485 aa24.06■■□□□ 1.44
VCPKMT-205ENST00000569518 THAP12O43422 761 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 KIF4AO95239 1232 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 CXCR5P32302 372 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 NOMO3P69849 1222 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 PTGISQ16647 500 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 ZNF653Q96CK0 615 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 CYFIP2Q96F07 1278 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 SMYD3Q9H7B4 428 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 CYP3A43Q9HB55 503 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 CTTNBP2NLQ9P2B4 639 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 IPPQ9Y573 584 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 ATMINO43313 823 aaPredicted RBP24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 CTSHP09668 335 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 AKAP5P24588 427 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 RAP1GAPP47736 663 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 PRMT2P55345 433 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 ITGA7Q13683 1181 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 NAA35Q5VZE5 725 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 LHX8Q68G74 356 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 MCOLN2Q8IZK6 566 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 TSPAN18Q96SJ8 248 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 RNF39Q9H2S5 420 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 TUBGCP4Q9UGJ1 667 aa24.05■■□□□ 1.44
VCPKMT-205ENST00000569518 SCN1AP35498 2009 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 DNAH12Q6ZR08 3092 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 TUBB4BP68371 445 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 RPS6KA1Q15418 735 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 C11orf63Q6NUN7 778 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 MON1BQ7L1V2 547 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 PEX26Q7Z412 305 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 CPA5Q8WXQ8 436 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 RPGRIP1Q96KN7 1286 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 APOL6Q9BWW8 343 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 FAM124BQ9H5Z6 455 aaPredicted RBP24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 ST3GAL5Q9UNP4 418 aa24.04■■□□□ 1.44
VCPKMT-205ENST00000569518 RPS6KA5O75582 802 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 P4HA1P13674 534 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 KCNE1P15382 129 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 ZSCAN20P17040 1043 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 CDH8P55286 799 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 PTPN11Q06124 597 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 ARHGEF6Q15052 776 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 WHAMMQ8TF30 809 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 TFAP2BQ92481 460 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 C18orf25Q96B23 403 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 HES6Q96HZ4 224 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 AVENQ9NQS1 362 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 UVRAGQ9P2Y5 699 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 MOXD2PA6NHM9 499 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms