RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PCDHB4Q9Y5E5 795 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 UMODL1Q5DID0 1318 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 ABLIM1O14639 778 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 CLDN3O15551 220 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 TOMM70O94826 608 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 EGFRP00533 1210 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 PRKCBP05771 671 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 SNX16P57768 344 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 NLRP11P59045 1033 aaKnown RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 CCNA1P78396 465 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 KLF1Q13351 362 aaPredicted RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 NCOA4Q13772 614 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 TATDN2Q93075 761 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC127Q96BQ5 260 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 BCO2Q9BYV7 579 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 TCRBV5S1A1TA0A578 114 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 FAM163BP0C2L3 166 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 PYGMP11217 842 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 MMP8P22894 467 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 LSP1P33241 339 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 PHKA2P46019 1235 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 MKRN3Q13064 507 aaKnown RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 TTLL4Q14679 1199 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 SGO2Q562F6 1265 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 SULF1Q8IWU6 871 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 LINC01465Q8N7H1 131 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 UBLCP1Q8WVY7 318 aaPredicted RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 UBN1Q9NPG3 1134 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 ANAPC7Q9UJX3 599 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 NEU2Q9Y3R4 380 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 PLXNA1Q9UIW2 1896 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 LRRIQ4A6NIV6 560 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 SETSIPP0DME0 302 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 RARAP10276 462 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 GHRP10912 638 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 SP2Q02086 613 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 IFFO1Q0D2I5 559 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC62Q6P9F0 684 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 TDRPQ86YL5 185 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 KAT5Q92993 513 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC77Q9BR77 488 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 NSRP1Q9H0G5 558 aaKnown RBP8.37□□□□□ -1.07
LINC00559-201ENST00000569476 NEUROG2Q9H2A3 272 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 ADAM22Q9P0K1 906 aa8.37□□□□□ -1.07
LINC00559-201ENST00000569476 DLATP10515 647 aaKnown RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TCF7P36402 384 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 SCNN1AP37088 669 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 MMP13P45452 471 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 GABRB2P47870 512 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 MAMLD1Q13495 774 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 KCTD2Q14681 263 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TAZQ16635 292 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 C4orf22Q6V702 233 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 DEFB132Q7Z7B7 95 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ZNF410Q86VK4 478 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC105Q8IYK2 499 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 MMP19Q99542 508 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 PDGFDQ9GZP0 370 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 BTBD7Q9P203 1132 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TMEM191CA6NGB0 347 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 PHACTR2O75167 634 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TJP3O95049 919 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TMEM191BP0C7N4 346 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 LAMTOR4Q0VGL1 99 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 STAT4Q14765 748 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ZC3H12AQ5D1E8 599 aaKnown RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 NLRP14Q86W24 1093 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 THNSL1Q8IYQ7 743 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 KRT35Q92764 455 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 FRMD8Q9BZ67 464 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 POLD4Q9HCU8 107 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ERVK-5Q9HDB9 667 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ESYT3A0FGR9 886 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 TRAPPC3O43617 180 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 RPL21P46778 160 aaKnown RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 FKBP1BP68106 108 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 DCAF4L1Q3SXM0 396 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 NKD2Q969F2 451 aaPredicted RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 IFT122Q9HBG6 1241 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 SSU72Q9NP77 194 aaKnown RBP8.36□□□□□ -1.07
LINC00559-201ENST00000569476 SENP1Q9P0U3 644 aa8.36□□□□□ -1.07
LINC00559-201ENST00000569476 ANK1P16157 1881 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 RIPK2O43353 540 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 ECM2O94769 699 aaPredicted RBP8.35□□□□□ -1.07
LINC00559-201ENST00000569476 KRT7P08729 469 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 ATF2P15336 505 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 GYS2P54840 703 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 ITIH4Q14624 930 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 PPP1R7Q15435 360 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 KRT71Q3SY84 523 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 ZSWIM2Q8NEG5 633 aa8.35□□□□□ -1.07
LINC00559-201ENST00000569476 BCAS4Q8TDM0 211 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms