RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 APOL6Q9BWW8 343 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
CDH13-214ENST00000569455 FAM124BQ9H5Z6 455 aaPredicted RBP8.19□□□□□ -1.1
CDH13-214ENST00000569455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH13-214ENST00000569455 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 SEPT11Q9NVA2 429 aaKnown RBP8.19□□□□□ -1.1
CDH13-214ENST00000569455 DPP3Q9NY33 737 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 NAGPAQ9UK23 515 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 TBX21Q9UL17 535 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 INTUQ9ULD6 942 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
CDH13-214ENST00000569455 UBQLN1Q9UMX0 589 aaKnown RBP8.19□□□□□ -1.1
CDH13-214ENST00000569455 GUCA1BQ9UMX6 200 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 ATP11BQ9Y2G3 1177 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 IPPQ9Y573 584 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 PCDHB4Q9Y5E5 795 aa8.19□□□□□ -1.1
CDH13-214ENST00000569455 PRUNE2Q8WUY3 3088 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 ZNF263O14978 683 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 CYP26A1O43174 497 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 TIMP1P01033 207 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 CST3P01034 146 aaPredicted RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 ITGB3P05106 788 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 PFKMP08237 780 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 H2AFZP0C0S5 128 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 ITGA4P13612 1032 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 CYP11B1P15538 503 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 ATF7P17544 494 aaPredicted RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 CASQ1P31415 396 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 TRIM71Q2Q1W2 868 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 SPOPLQ6IQ16 392 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 PPP1R2P3Q6NXS1 205 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 ALKBH5Q6P6C2 394 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 SYT10Q6XYQ8 523 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 H2AFVQ71UI9 128 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 RNF10Q8N5U6 811 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 SECISBP2LQ93073 1101 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 HPDLQ96IR7 371 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 NXF3Q9H4D5 531 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 APOBEC3GQ9HC16 384 aaKnown RBP8.18□□□□□ -1.1
CDH13-214ENST00000569455 ERVK-5Q9HDB9 667 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 CNTN3Q9P232 1028 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 DNAI1Q9UI46 699 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 PCDHB2Q9Y5E7 798 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 MYH10P35580 1976 aa8.18□□□□□ -1.1
CDH13-214ENST00000569455 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDH13-214ENST00000569455 MEFVO15553 781 aaPredicted RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 TACC1O75410 805 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 GHRP10912 638 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 CKBP12277 381 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 GZMAP12544 262 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 KCNE1P15382 129 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 CYP3A5P20815 502 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ACO1P21399 889 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 AKAP5P24588 427 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 CD52P31358 61 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TNNC1P63316 161 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 CDR2Q01850 454 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 LPIN1Q14693 890 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 WDR72Q3MJ13 1102 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 XKR4Q5GH76 650 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ZNF569Q5MCW4 686 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ZNF618Q5T7W0 954 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 MFSD5Q6N075 450 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TMEM270Q6UE05 265 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ALKAL1Q6UXT8 129 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 TMEM199Q8N511 208 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 RBBP8NLQ8NC74 664 aaPredicted RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 SLC30A5Q8TAD4 765 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 PGBD4Q96DM1 585 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ZNF560Q96MR9 790 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 FAM161BQ96MY7 647 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 NOX5Q96PH1 765 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 RPS6KC1Q96S38 1066 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 ARID3AQ99856 593 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 LBHD1Q9BQE6 289 aaPredicted RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 SYT11Q9BT88 431 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TRAIPQ9BWF2 469 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 DNAI2Q9GZS0 605 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 LACRTQ9GZZ8 138 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 XYLT2Q9H1B5 865 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TRPV6Q9H1D0 765 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms