RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ZDHHC7Q9NXF8 308 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 DPP3Q9NY33 737 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 FBXW11Q9UKB1 542 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 ITGA11Q9UKX5 1188 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 NR2E1Q9Y466 385 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 CDY1Q9Y6F8 540 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 KMT2EQ8IZD2 1858 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 TICRRQ7Z2Z1 1910 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 ANO9A1A5B4 782 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 GOLGA8IPA6NC78 632 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 GOLGA8JA6NMD2 632 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 PDXKO00764 312 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 TGM5O43548 720 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 PRPF40AO75400 957 aaKnown RBP10.61□□□□□ -0.71
CLN6-209ENST00000569336 SMC2O95347 1197 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 TNNC2P02585 160 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 RPL17P18621 184 aaKnown RBP10.61□□□□□ -0.71
CLN6-209ENST00000569336 OR1D2P34982 312 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 HOXD13P35453 343 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLN6-209ENST00000569336 TAF6P49848 677 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 CYP2J2P51589 502 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 TFAMQ00059 246 aaKnown RBP10.61□□□□□ -0.71
CLN6-209ENST00000569336 YWHAHQ04917 246 aaPredicted RBP10.61□□□□□ -0.71
CLN6-209ENST00000569336 STK4Q13043 487 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 ATAT1Q5SQI0 421 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 C9orf57Q5W0N0 161 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 CD300LGQ6UXG3 332 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 DSTYKQ6XUX3 929 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 RTL10Q7L3V2 364 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 WDR49Q8IV35 697 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 EFCAB13Q8IY85 973 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 GJD3Q8N144 294 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 ANKRD36BP1Q96IX9 119 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 FNBP1Q96RU3 617 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 CLSTN3Q9BQT9 956 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 S1PR5Q9H228 398 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 DSEQ9UL01 958 aa10.61□□□□□ -0.71
CLN6-209ENST00000569336 TECTAO75443 2155 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 ZNF318Q5VUA4 2279 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 WDFY4Q6ZS81 3184 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
CLN6-209ENST00000569336 PIRO00625 290 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TGFB1I1O43294 461 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 CALUO43852 315 aaPredicted RBP10.6□□□□□ -0.71
CLN6-209ENST00000569336 EXOC3O60645 756 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 HNRNPA1P09651 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLN6-209ENST00000569336 CPB1P15086 417 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TYMPP19971 482 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 HOXA9P31269 272 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 LILRA4P59901 499 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 RAB33AQ14088 237 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 SLC8B1Q6J4K2 584 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 LILRA6Q6PI73 481 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 CCDC149Q6ZUS6 474 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 METTL23Q86XA0 190 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 CBWD2Q8IUF1 395 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 SLC9A9Q8IVB4 645 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 LRRC52Q8N7C0 313 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 KREMEN2Q8NCW0 462 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 TMEM174Q8WUU8 243 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 GSDMAQ96QA5 445 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 APOL5Q9BWW9 433 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
CLN6-209ENST00000569336 CCDC195A0A1B0GUA6 201 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 OR6C75A6NL08 312 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PRRG1O14668 218 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 CLIC2O15247 247 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 XYLBO75191 536 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ZMYND10O75800 440 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 OAZ2O95190 189 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PAPLNO95428 1278 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ITGB3P05106 788 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 C8AP07357 584 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ELF1P32519 619 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 GUCY2FP51841 1108 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ROR1Q01973 937 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 CYP24A1Q07973 514 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 MYO1EQ12965 1108 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PNOCQ13519 176 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 SNW1Q13573 536 aaKnown RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 MYBPC2Q14324 1141 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PSMD6Q15008 389 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 UVSSAQ2YD98 709 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PPM1LQ5SGD2 360 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 OVOS1Q6IE37 1185 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ELOA2Q8IYF1 753 aaPredicted RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 GUF1Q8N442 669 aaKnown RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 C12orf76Q8N812 135 aaPredicted RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 TDRD5Q8NAT2 981 aaKnown RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms