RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 BEST2Q8NFU1 509 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 FAM200AQ8TCP9 573 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 GAB3Q8WWW8 586 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 RSPRY1Q96DX4 576 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
SNX29-207ENST00000568949 KIFC3Q9BVG8 833 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 LRRC3Q9BY71 257 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 CDT1Q9H211 546 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
SNX29-207ENST00000568949 WNT7AO00755 349 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 MUTP22033 750 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 RAP1GAPP47736 663 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 CCINQ13939 588 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 CEP120Q8N960 986 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 DDX12PQ92771 950 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
SNX29-207ENST00000568949 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 C2orf42Q9NWW7 574 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 OBP2AQ9NY56 170 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 YIPF1Q9Y548 306 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
SNX29-207ENST00000568949 BTBD18B2RXH4 712 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 RPP40O75818 363 aaKnown RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 AKAP3O75969 853 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 FDPSP14324 419 aaKnown RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 CPB1P15086 417 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 MCM4P33991 863 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 ZNF568Q3ZCX4 644 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 RNF19BQ6ZMZ0 732 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 TMC8Q8IU68 726 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 ERMNQ8TAM6 284 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 ACO2Q99798 780 aaKnown RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
SNX29-207ENST00000568949 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
SNX29-207ENST00000568949 NUP210Q8TEM1 1887 aaPredicted RBP13.63□□□□□ -0.23
SNX29-207ENST00000568949 A0A1W2PRU2 124 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 DPYSL4O14531 572 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 OAZ2O95190 189 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 KCNK5O95279 499 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 MCF2P10911 925 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 WEE1P30291 646 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 EPHB3P54753 998 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 OSTNP61366 133 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 PON2Q15165 354 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 PLA2G2CQ5R387 149 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
SNX29-207ENST00000568949 MRPL4Q9BYD3 311 aaKnown RBP13.63□□□□□ -0.23
SNX29-207ENST00000568949 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 TMEM134Q9H6X4 195 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
SNX29-207ENST00000568949 RXFP3Q9NSD7 469 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 GTSE1Q9NYZ3 720 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
SNX29-207ENST00000568949 TPCN1Q9ULQ1 816 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 ASB3Q9Y575 518 aa13.63□□□□□ -0.23
SNX29-207ENST00000568949 EXTL3O43909 919 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 DTNBO60941 627 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 VNN2O95498 520 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 FGF19O95750 216 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 PROZP22891 400 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 HOXC13P31276 330 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
SNX29-207ENST00000568949 PTPAQ15257 358 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 CCDC6Q16204 474 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
SNX29-207ENST00000568949 ZC3H10Q96K80 434 aaKnown RBP13.62□□□□□ -0.23
SNX29-207ENST00000568949 LRRC3BQ96PB8 259 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 MKNK1Q9BUB5 465 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
SNX29-207ENST00000568949 VPS45Q9NRW7 570 aa13.62□□□□□ -0.23
SNX29-207ENST00000568949 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
SNX29-207ENST00000568949 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 M0QZQ0 153 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 ABLIM1O14639 778 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 ATG13O75143 517 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 CCDC192P0DO97 292 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 MCM7P33993 719 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 DUSP4Q13115 394 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 GPR17Q13304 367 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 STXBP5Q5T5C0 1151 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 HAUS3Q68CZ6 603 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 MPZL3Q6UWV2 235 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 GAREM2Q75VX8 874 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms