RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 SPTLC1O15269 473 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LRRN2O75325 713 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 TADA2AO75478 443 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ASS1P00966 412 aaKnown RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ITGB1P05556 798 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 P4HA1P13674 534 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SLC9A1P19634 815 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 PAX3P23760 479 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 PON1P27169 355 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 CTNNB1P35222 781 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 PPM1AP35813 382 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 PBX2P40425 430 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LILRA4P59901 499 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 TNNC1P63316 161 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 NOP14P78316 857 aaKnown RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SMAD3P84022 425 aaKnown RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LRMPQ12912 555 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 GSE1Q14687 1217 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SYCP1Q15431 976 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 WDR72Q3MJ13 1102 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ZNF667Q5HYK9 610 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SPOPLQ6IQ16 392 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 TRIM65Q6PJ69 517 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 DSTYKQ6XUX3 929 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SLC39A11Q8N1S5 342 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LMO3Q8TAP4 145 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ELMO3Q96BJ8 720 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SAMD11Q96NU1 681 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 NT5C1BQ96P26 610 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ERGIC2Q96RQ1 377 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LSM14BQ9BX40 385 aaKnown RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 XYLT2Q9H1B5 865 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 NKX2-4Q9H2Z4 354 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 VRTNQ9H8Y1 702 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 MARCH5Q9NX47 278 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SPG21Q9NZD8 308 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 ADAM28Q9UKQ2 775 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 SF3B1O75533 1304 aaKnown RBP eCLIP8.25□□□□□ -1.098e-6■■■■■ 107
SCAPER-221ENST00000568549 ATG2AQ2TAZ0 1938 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 A0A1W2PQC6 194 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ARHGEF37A1IGU5 675 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 I3L4J1 428 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TRAPPC3O43617 180 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 HUS1O60921 280 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 LINC00271P0C7V0 271 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ODC1P11926 461 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 IGFBP6P24592 240 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 DNAJB2P25686 324 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 BRCC3P46736 316 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 AARSP49588 968 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 KLK7P49862 253 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ZNF75DP51815 510 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TAP1Q03518 808 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 PTPN21Q16825 1174 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TIGD5Q53EQ6 642 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 FUT10Q6P4F1 479 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 CD300LGQ6UXG3 332 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SCARA5Q6ZMJ2 495 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TMEM173Q86WV6 379 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 ARHGEF19Q8IW93 802 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 PPM1KQ8N3J5 372 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 BCL7CQ8WUZ0 217 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TATDN2Q93075 761 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TMEM169Q96HH4 297 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 IGSF21Q96ID5 467 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SUSD3Q96L08 255 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SENP8Q96LD8 212 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 TGS1Q96RS0 853 aaKnown RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 C17orf80Q9BSJ5 609 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 NIF3L1Q9GZT8 377 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 APOBEC3GQ9HC16 384 aaKnown RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SIX2Q9NPC8 291 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 FAM207AQ9NSI2 230 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 GDAP2Q9NXN4 497 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 POLIQ9UNA4 740 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SIK3Q9Y2K2 1263 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 SNX9Q9Y5X1 595 aa8.24□□□□□ -1.09
SCAPER-221ENST00000568549 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
SCAPER-221ENST00000568549 M0QZQ0 153 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 CYB561D2O14569 222 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 FGF18O76093 207 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 RFX1P22670 979 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 TBXAS1P24557 533 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-221ENST00000568549 BMPR1AP36894 532 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 PBX1P40424 430 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 ASPAP45381 313 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 RAP1GAPP47736 663 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 MRE11P49959 708 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 MFAP3P55082 362 aa8.23□□□□□ -1.09
SCAPER-221ENST00000568549 ERVK-21P61565 698 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms