RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
LINC01228-201ENST00000567966 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 TUSC3Q13454 348 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 ZCWPW2Q504Y3 356 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 USP37Q86T82 979 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 COLGALT2Q8IYK4 626 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
LINC01228-201ENST00000567966 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 ERCC4Q92889 916 aaPredicted RBP11.97□□□□□ -0.49
LINC01228-201ENST00000567966 MFSD14AQ96MC6 490 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 KLHL5Q96PQ7 755 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 FAM213AQ9BRX8 229 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 COLEC11Q9BWP8 271 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 CACNG4Q9UBN1 327 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 FRMD4BQ9Y2L6 1034 aa11.97□□□□□ -0.49
LINC01228-201ENST00000567966 LACTBL1A8MY62 500 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 C2CD4DB7Z1M9 353 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 C2CD2LO14523 706 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 CETN3O15182 167 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 CLIC2O15247 247 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 EXOC3O60645 756 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 FGFR1OPO95684 399 aaKnown RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 EFEMP2O95967 443 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 NR3C1P04150 777 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 ERCC5P28715 1186 aaPredicted RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 OR1G1P47890 313 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 AP3M2P53677 418 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 NLRP12P59046 1061 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 ITIH3Q06033 890 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 ADAM9Q13443 819 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 BMS1Q14692 1282 aaKnown RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 NAB2Q15742 525 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 SNRNP35Q16560 246 aaKnown RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 CES5AQ6NT32 575 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 DCLRE1AQ6PJP8 1040 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 SASS6Q6UVJ0 657 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 TMC5Q6UXY8 1006 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 BMP8AQ7Z5Y6 402 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 BRSK2Q8IWQ3 736 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 SMOC2Q9H3U7 446 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 PCIF1Q9H4Z3 704 aa11.96□□□□□ -0.49
LINC01228-201ENST00000567966 RBAKQ9NYW8 714 aaPredicted RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 UBQLN1Q9UMX0 589 aaKnown RBP11.96□□□□□ -0.49
LINC01228-201ENST00000567966 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.5
LINC01228-201ENST00000567966 DENND4AQ7Z401 1863 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 TMEM189-UBE2V1I3L0A0 370 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 BIN1O00499 593 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 IKBKBO14920 756 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 CXCL8P10145 99 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 NR2F2P24468 414 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 KLRC2P26717 231 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 PSMC2P35998 433 aaKnown RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 TNFSF9P41273 254 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 CLCN4P51793 760 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 CLDN10P78369 228 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 PSMD6Q15008 389 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 PTPN21Q16825 1174 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 DUOXA2Q1HG44 320 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 ANKRD40Q6AI12 368 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 ZC3H3Q8IXZ2 948 aaKnown RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 SMYD4Q8IYR2 804 aaPredicted RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 RNF168Q8IYW5 571 aaPredicted RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 BEST2Q8NFU1 509 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 ASIC4Q96FT7 647 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 B3GALT6Q96L58 329 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
LINC01228-201ENST00000567966 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 HERC2P3Q9BVR0 1158 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 KMT2EQ8IZD2 1858 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 WDFY4Q6ZS81 3184 aa11.95□□□□□ -0.5
LINC01228-201ENST00000567966 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
LINC01228-201ENST00000567966 MEFVO15553 781 aaPredicted RBP11.94□□□□□ -0.5
LINC01228-201ENST00000567966 TRAPPC3O43617 180 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 GNA14O95837 355 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 SOD2P04179 222 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 ASGR2P07307 311 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 LRPAP1P30533 357 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 MTHFRP42898 656 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 CYP2J2P51589 502 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 CYP24A1Q07973 514 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 ELAVL2Q12926 359 aaKnown RBP11.94□□□□□ -0.5
LINC01228-201ENST00000567966 PAK1Q13153 545 aa11.94□□□□□ -0.5
LINC01228-201ENST00000567966 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms