RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 HVCN1Q96D96 273 aa20.21■□□□□ 0.83
LINC01238-205ENST00000567549 IER2Q9BTL4 223 aa20.21■□□□□ 0.83
LINC01238-205ENST00000567549 RPP25Q9BUL9 199 aaKnown RBP20.21■□□□□ 0.83
LINC01238-205ENST00000567549 TRMT61BQ9BVS5 477 aaKnown RBP20.21■□□□□ 0.83
LINC01238-205ENST00000567549 ASB7Q9H672 318 aa20.21■□□□□ 0.83
LINC01238-205ENST00000567549 BRD9Q9H8M2 597 aa20.21■□□□□ 0.83
LINC01238-205ENST00000567549 ASB3Q9Y575 518 aa20.21■□□□□ 0.83
LINC01238-205ENST00000567549 RIF1Q5UIP0 2472 aaKnown RBP20.21■□□□□ 0.83
LINC01238-205ENST00000567549 FAM170BA6NMN3 283 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 PLCG1P19174 1290 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 CACNB1Q02641 598 aaPredicted RBP20.2■□□□□ 0.82
LINC01238-205ENST00000567549 TWF1Q12792 350 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 POSTNQ15063 836 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 SEZ6Q53EL9 994 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 ARSHQ5FYA8 562 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 FOXQ1Q9C009 403 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 LTB4R2Q9NPC1 389 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 SPATA6Q9NWH7 488 aaPredicted RBP20.2■□□□□ 0.82
LINC01238-205ENST00000567549 DLGAP2Q9P1A6 1054 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 HSFX1Q9UBD0 423 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 SEL1LQ9UBV2 794 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 STK17AQ9UEE5 414 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 EXOC7Q9UPT5 735 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 NOTCH4Q99466 2003 aa20.2■□□□□ 0.82
LINC01238-205ENST00000567549 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 KINO60870 393 aaKnown RBP20.19■□□□□ 0.82
LINC01238-205ENST00000567549 CEBPBP17676 345 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 DDIT3P35638 169 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 RPS9P46781 194 aaKnown RBP20.19■□□□□ 0.82
LINC01238-205ENST00000567549 AARSP49588 968 aaKnown RBP eCLIP20.19■□□□□ 0.82
LINC01238-205ENST00000567549 GTF2BQ00403 316 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SMARCB1Q12824 385 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SF3A1Q15459 793 aaKnown RBP20.19■□□□□ 0.82
LINC01238-205ENST00000567549 ZBTB6Q15916 424 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SLC5A9Q2M3M2 681 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 PRSS36Q5K4E3 855 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 OVOS1Q6IE37 1185 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 TPRG1Q6ZUI0 275 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 ITIH5Q86UX2 942 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 METTL23Q86XA0 190 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 MAP4K3Q8IVH8 894 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SMARCD2Q92925 531 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 FAM212AQ96EL1 285 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 MSANTD3Q96H12 275 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 ST6GALNAC4Q9H4F1 302 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 SLITRK6Q9H5Y7 841 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 TRPV5Q9NQA5 729 aa20.19■□□□□ 0.82
LINC01238-205ENST00000567549 A0A0B4J269 797 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 VPS37CA5D8V6 355 aaPredicted RBP20.18■□□□□ 0.82
LINC01238-205ENST00000567549 LACTBL1A8MY62 500 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 SPTLC1O15269 473 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 SEC24AO95486 1093 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 ADRB2P07550 413 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 SP9P0CG40 484 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 MYL4P12829 197 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 GLULP15104 373 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 PSMC3P17980 439 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
LINC01238-205ENST00000567549 EPHA5P54756 1037 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 GPR17Q13304 367 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 MCM6Q14566 821 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 TMEM132DQ14C87 1099 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 ENOX2Q16206 610 aaKnown RBP20.18■□□□□ 0.82
LINC01238-205ENST00000567549 NT5DC4Q86YG4 428 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 YAF2Q8IY57 180 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
LINC01238-205ENST00000567549 ASB16Q96NS5 453 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 HINFPQ9BQA5 517 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 BACH2Q9BYV9 841 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 C2CD2Q9Y426 696 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 USP34Q70CQ2 3546 aa20.18■□□□□ 0.82
LINC01238-205ENST00000567549 GAP43P17677 238 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 VEPH1Q14D04 833 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 KARSQ15046 597 aaKnown RBP20.17■□□□□ 0.82
LINC01238-205ENST00000567549 ARHGAP15Q53QZ3 475 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 ADALQ6DHV7 355 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 RNF19BQ6ZMZ0 732 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 THEM5Q8N1Q8 247 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 ST13P5Q8NFI4 369 aaPredicted RBP20.17■□□□□ 0.82
LINC01238-205ENST00000567549 FAM126AQ9BYI3 521 aaPredicted RBP20.17■□□□□ 0.82
LINC01238-205ENST00000567549 TRPV4Q9HBA0 871 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 BLOC1S4Q9NUP1 217 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 ZMYM5Q9UJ78 669 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 CPSF3Q9UKF6 684 aaKnown RBP20.17■□□□□ 0.82
LINC01238-205ENST00000567549 YIPF1Q9Y548 306 aa20.17■□□□□ 0.82
LINC01238-205ENST00000567549 TNFSF9P41273 254 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 TUFMP49411 452 aaKnown RBP20.16■□□□□ 0.82
LINC01238-205ENST00000567549 SPAG1Q07617 926 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 ALCAMQ13740 583 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 FAM78AQ5JUQ0 283 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 TANGO2Q6ICL3 276 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 C2orf15Q8WU43 125 aaKnown RBP20.16■□□□□ 0.82
LINC01238-205ENST00000567549 ATRIPQ8WXE1 791 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 GCNAQ96QF7 691 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 AGO2Q9UKV8 859 aaKnown RBP20.16■□□□□ 0.82
LINC01238-205ENST00000567549 PCDHGA2Q9Y5H1 932 aa20.16■□□□□ 0.82
LINC01238-205ENST00000567549 ZNF263O14978 683 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 MEFVO15553 781 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms