RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 MKNK1Q9BUB5 465 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 IGFLR1Q9H665 355 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 CLDND1Q9NY35 253 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 ITGA11Q9UKX5 1188 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 BACE2Q9Y5Z0 518 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 NCOR1O75376 2440 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 LRRIQ3A6PVS8 624 aaPredicted RBP13.4□□□□□ -0.26
RNF40-211ENST00000567365 BIN1O00499 593 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 C2CD2LO14523 706 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 OAZ2O95190 189 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 C4BPAP04003 597 aaKnown RBP13.4□□□□□ -0.26
RNF40-211ENST00000567365 ITGB3P05106 788 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 CYP11A1P05108 521 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 BMP1P13497 986 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 EPCAMP16422 314 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 TYMPP19971 482 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 POLR2BP30876 1174 aaKnown RBP13.4□□□□□ -0.26
RNF40-211ENST00000567365 DLG4P78352 724 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 ADAM9Q13443 819 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 PSMD5Q16401 504 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 LEXMQ3ZCV2 418 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 C15orf39Q6ZRI6 1047 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 NOC3LQ8WTT2 800 aaKnown RBP13.4□□□□□ -0.26
RNF40-211ENST00000567365 CCDC127Q96BQ5 260 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 SENP8Q96LD8 212 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 UHRF1Q96T88 793 aaPredicted RBP13.4□□□□□ -0.26
RNF40-211ENST00000567365 EMILIN2Q9BXX0 1053 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
RNF40-211ENST00000567365 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 PSMA7O14818 248 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 DLATP10515 647 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 RPL17P18621 184 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 KCNA5P22460 613 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 MCM4P33991 863 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 NDUFV1P49821 464 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 TAF6P49848 677 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 KCNQ1P51787 676 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 FKBP3Q00688 224 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 RAB33AQ14088 237 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 ANKRD36BP1Q96IX9 119 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 GDAP2Q9NXN4 497 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
RNF40-211ENST00000567365 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
RNF40-211ENST00000567365 KPNA7A9QM74 516 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 H3BQ06 376 aaPredicted RBP13.38□□□□□ -0.27
RNF40-211ENST00000567365 IKBKBO14920 756 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
RNF40-211ENST00000567365 CST3P01034 146 aaPredicted RBP13.38□□□□□ -0.27
RNF40-211ENST00000567365 ADH1AP07327 375 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 PNPLA4P41247 253 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 AP3M2P53677 418 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 RBP5P82980 135 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 CREMQ03060 361 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 ZACNQ401N2 412 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
RNF40-211ENST00000567365 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 INTS8Q75QN2 995 aaKnown RBP13.38□□□□□ -0.27
RNF40-211ENST00000567365 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 APPL2Q8NEU8 664 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 HDAC7Q8WUI4 952 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 SUSD6Q92537 303 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 CASP10Q92851 521 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 FRMD4BQ9Y2L6 1034 aa13.38□□□□□ -0.27
RNF40-211ENST00000567365 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 CETN3O15182 167 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 TGM5O43548 720 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 ABLIM3O94929 683 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 VNN1O95497 513 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 MBD3O95983 291 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 TNNC2P02585 160 aa13.37□□□□□ -0.27
RNF40-211ENST00000567365 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms