RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 FAM213AQ9BRX8 229 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 CBX8Q9HC52 389 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 MAN1C1Q9NR34 630 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 CGNQ9P2M7 1197 aaKnown RBP14.53□□□□□ -0.08
CLK3-218ENST00000566926 MTRRQ9UBK8 725 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 TUBGCP4Q9UGJ1 667 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 BACE2Q9Y5Z0 518 aa14.53□□□□□ -0.08
CLK3-218ENST00000566926 PSMA7O14818 248 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 TGM5O43548 720 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 EXTL3O43909 919 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 BMP6P22004 513 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 TKTP29401 623 aaKnown RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 EHHADHQ08426 723 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 LILRA6Q6PI73 481 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 C11orf57Q6ZUT1 292 aaPredicted RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 RTL10Q7L3V2 364 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 EPM2AIP1Q7L775 607 aaPredicted RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 HS2ST1Q7LGA3 356 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 GPR149Q86SP6 731 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 GLYCTKQ8IVS8 523 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 GPD1LQ8N335 351 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 ENOX1Q8TC92 643 aaKnown RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 CACTINQ8WUQ7 758 aaKnown RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 DHTKD1Q96HY7 919 aaPredicted RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 CLSTN3Q9BQT9 956 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 OXCT2Q9BYC2 517 aaPredicted RBP14.52□□□□□ -0.09
CLK3-218ENST00000566926 FGFBP2Q9BYJ0 223 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 RHOBTB2Q9BYZ6 727 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 NR2E1Q9Y466 385 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 DENND4AQ7Z401 1863 aa14.52□□□□□ -0.09
CLK3-218ENST00000566926 CCDC195A0A1B0GUA6 201 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 BICDL2A1A5D9 508 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 ALADP13716 330 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
CLK3-218ENST00000566926 CASP1P29466 404 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 RAB33AQ14088 237 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 IQCB1Q15051 598 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 SURF1Q15526 300 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 VARS2Q5ST30 1063 aaKnown RBP14.51□□□□□ -0.09
CLK3-218ENST00000566926 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
CLK3-218ENST00000566926 TMC5Q6UXY8 1006 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 C12orf76Q8N812 135 aaPredicted RBP14.51□□□□□ -0.09
CLK3-218ENST00000566926 KREMEN2Q8NCW0 462 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 GOLGA5Q8TBA6 731 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 HPS3Q969F9 1004 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 SAAL1Q96ER3 474 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 IKZF4Q9H2S9 585 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 PCIF1Q9H4Z3 704 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 RBAKQ9NYW8 714 aaPredicted RBP14.51□□□□□ -0.09
CLK3-218ENST00000566926 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 C5orf42Q9H799 3197 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 DOCK6Q96HP0 2047 aa14.51□□□□□ -0.09
CLK3-218ENST00000566926 ZNF233A6NK53 670 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 LOC730098B7Z3J9 87 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 I3L4J1 428 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 M0QZQ0 153 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 NFICP08651 508 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 OR1D2P34982 312 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 PAK1Q13153 545 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 BMT2Q1RMZ1 405 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 C9orf57Q5W0N0 161 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 ZNF280DQ6N043 979 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 DSTYKQ6XUX3 929 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 USP37Q86T82 979 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 LUZP1Q86V48 1076 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 DHX40Q8IX18 779 aaKnown RBP14.5□□□□□ -0.09
CLK3-218ENST00000566926 ADSSL1Q8N142 457 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 GUF1Q8N442 669 aaKnown RBP14.5□□□□□ -0.09
CLK3-218ENST00000566926 GLIS3Q8NEA6 775 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
CLK3-218ENST00000566926 SCFD1Q8WVM8 642 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 CBWD1Q9BRT8 395 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 CD320Q9NPF0 282 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 DPP3Q9NY33 737 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 CDY1Q9Y6F8 540 aa14.5□□□□□ -0.09
CLK3-218ENST00000566926 GOLGA8IPA6NC78 632 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 GOLGA8JA6NMD2 632 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 PPP1R3GB7ZBB8 358 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 TULP1O00294 542 aaPredicted RBP14.49□□□□□ -0.09
CLK3-218ENST00000566926 ZMYND10O75800 440 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 HNRNPA1P09651 372 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLK3-218ENST00000566926 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 IGFBP6P24592 240 aaPredicted RBP14.49□□□□□ -0.09
CLK3-218ENST00000566926 HOXA9P31269 272 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 AARSP49588 968 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLK3-218ENST00000566926 MRPL58Q14197 206 aaKnown RBP14.49□□□□□ -0.09
CLK3-218ENST00000566926 KNOP1Q1ED39 458 aaKnown RBP14.49□□□□□ -0.09
CLK3-218ENST00000566926 CTXN3Q4LDR2 81 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 ISM2Q6H9L7 571 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 SLC8B1Q6J4K2 584 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 CCDC149Q6ZUS6 474 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms