RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 USP41Q3LFD5 358 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 CCDC40Q4G0X9 1142 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 PTCRAQ6ISU1 281 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 TTI2Q6NXR4 508 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 EP400NLQ6ZTU2 488 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 INTS8Q75QN2 995 aaKnown RBP17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 USP37Q86T82 979 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 CSGALNACT2Q8N6G5 542 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 PLEKHO2Q8TD55 490 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 PARD3BQ8TEW8 1205 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 TMEM174Q8WUU8 243 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 RIN2Q8WYP3 895 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 IGFLR1Q9H665 355 aa17.64■□□□□ 0.41
SCAMP2-208ENST00000566557 HIDE1A8MVS5 230 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 SLC16A3O15427 465 aaKnown RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TKTP29401 623 aaKnown RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 NRIP1P48552 1158 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TAF6P49848 677 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 DLG4P78352 724 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 PTPN14Q15678 1187 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 SV2CQ496J9 727 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 DCAF17Q5H9S7 520 aaPredicted RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 RBM43Q6ZSC3 357 aaKnown RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TMC2Q8TDI7 906 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 DUSP9Q99956 384 aaKnown RBP17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 MKNK1Q9BUB5 465 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 KCNH6Q9H252 994 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 TLE6Q9H808 572 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 RWDD2AQ9UIY3 292 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
SCAMP2-208ENST00000566557 VWA8A3KMH1 1905 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 ANO9A1A5B4 782 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 PER2O15055 1255 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 MAPK13O15264 365 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 RBP5P82980 135 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 STX1AQ16623 288 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 RTP2Q5QGT7 225 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 PRSS55Q6UWB4 352 aaPredicted RBP17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 CD300LGQ6UXG3 332 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 GLYCTKQ8IVS8 523 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 RNF168Q8IYW5 571 aaPredicted RBP17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 CEP63Q96MT8 703 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 EMILIN2Q9BXX0 1053 aa17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 GZF1Q9H116 711 aaPredicted RBP17.62■□□□□ 0.41
SCAMP2-208ENST00000566557 TSC2P49815 1807 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 C2orf71A6NGG8 1288 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 PIRO00625 290 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 DCXO43602 365 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 ODC1P11926 461 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 GTF2F1P35269 517 aaKnown RBP eCLIP17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 PNPLA4P41247 253 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 DSG1Q02413 1049 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 HYAL1Q12794 435 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 TRPC3Q13507 836 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 PSMD5Q16401 504 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 ZC3H3Q8IXZ2 948 aaKnown RBP17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 MRPL43Q8N983 215 aaKnown RBP17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 ANO10Q9NW15 660 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 ARMCX3Q9UH62 379 aaPredicted RBP17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 SIX4Q9UIU6 781 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 PCDHB8Q9UN66 801 aa17.61■□□□□ 0.41
SCAMP2-208ENST00000566557 SCN1AP35498 2009 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 SPTLC1O15269 473 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 EFEMP2O95967 443 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 RPL17P18621 184 aaKnown RBP17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 FGFR3P22607 806 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 PIK3CAP42336 1068 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 AP3M2P53677 418 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 LILRA4P59901 499 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 MYO1EQ12965 1108 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 SKOR2Q2VWA4 1001 aaPredicted RBP17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 TDRD10Q5VZ19 366 aaKnown RBP17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 LLGL2Q6P1M3 1020 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 CREBRFQ8IUR6 639 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 ZNF516Q92618 1163 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 SENP8Q96LD8 212 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 TIMM13Q9Y5L4 95 aaPredicted RBP17.6■□□□□ 0.41
SCAMP2-208ENST00000566557 ARHGEF37A1IGU5 675 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 KPNA7A9QM74 516 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 SYN3O14994 580 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 CNPP09543 421 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 KLRC2P26717 231 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 GCLMP48507 274 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 CREMQ03060 361 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 TYRO3Q06418 890 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 DUSP6Q16828 381 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 PUS10Q3MIT2 529 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 KIAA0319Q5VV43 1072 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms