RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CEP72Q9P209 647 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 FBLN5Q9UBX5 448 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ADD3Q9UEY8 706 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PCDHB6Q9Y5E3 794 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 SNX5Q9Y5X3 404 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 X6R8D5 127 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1W2PQ27 194 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1W2PQ64 194 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1W2PQC6 194 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1W2PQD8 194 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GOLGA6L22H0YM25 854 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 AP3D1O14617 1153 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 AKR1B10O60218 316 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PRAMEF4O60810 478 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 SASH1O94885 1247 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MT-ND5P03915 603 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 NTRK1P04629 796 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PTMAP06454 111 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 EN2P19622 333 aaPredicted RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ENDOUP21128 410 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 WASP42768 502 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CARSP49589 748 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PER3P56645 1201 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 SOX8P57073 446 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 FOXO4P98177 505 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CDC42EP1Q00587 391 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TLE2Q04725 743 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 EXOSC9Q06265 439 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MGAT2Q10469 447 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TARDBPQ13148 414 aaKnown RBP eCLIP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC13A2Q13183 592 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PPP2R5CQ13362 524 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ERV3-1Q14264 604 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 NKPD1Q17RQ9 610 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 RILPL1Q5EBL4 403 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 HLA-DQA1Q5Y7H0 255 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC30A6Q6NXT4 461 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF783Q6ZMS7 281 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 RRAGAQ7L523 313 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PPP1R3BQ86XI6 285 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GATAD2AQ86YP4 633 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CREG2Q8IUH2 290 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GLB1L2Q8IW92 636 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC117Q8IWD4 279 aaPredicted RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 HSCBQ8IWL3 235 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 NRSN1Q8IZ57 195 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 NDUFAF2Q8N183 169 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 LZTR1Q8N653 840 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ARL10Q8N8L6 244 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CDYL2Q8N8U2 506 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GLIS1Q8NBF1 620 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC191Q8NCU4 936 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TMEM52Q8NDY8 209 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 OR6B3Q8NGW1 331 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CEP70Q8NHQ1 597 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PLEKHO2Q8TD55 490 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 KCNG4Q8TDN1 519 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CSGALNACT1Q8TDX6 532 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MYLIPQ8WY64 445 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 HERVK_113Q902F9 699 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ST8SIA4Q92187 359 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 UBE2FQ969M7 185 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MSLNLQ96KJ4 702 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 FAM167AQ96KS9 214 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MRGPRX1Q96LB2 322 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ALPK1Q96QP1 1244 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 UHRF1Q96T88 793 aaPredicted RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MPHOSPH8Q99549 860 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 MAGEB5Q9BZ81 275 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GPR63Q9BZJ6 419 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 SIL1Q9H173 461 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ADAM7Q9H2U9 754 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TMPRSS5Q9H3S3 457 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TAF1DQ9H5J8 278 aaPredicted RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 LDAHQ9H6V9 325 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 TM7SF3Q9NS93 570 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF212Q9UDV6 495 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 GIMAP2Q9UG22 337 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 CNOT6Q9ULM6 557 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 ASB1Q9Y576 335 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PCDHB4Q9Y5E5 795 aa3.76□□□□□ -1.81
HERPUD1-211ENST00000566550 PI4KAP2A4QPH2 592 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ACOT7O00154 380 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 HGSO14964 777 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 TBC1D4O60343 1298 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 DKC1O60832 514 aaKnown RBP eCLIP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 OPHN1O60890 802 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 KRT38O76015 456 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FSBPO95073 299 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ITGA2BP08514 1039 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CLTBP09497 229 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 MTHFD1P11586 935 aaKnown RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ALOX12P18054 663 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 HDCP19113 662 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 MALP21145 153 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ATICP31939 592 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 PHKA1P46020 1223 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 MAN2A2P49641 1150 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CCR9P51686 369 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms