RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 OTOGLQ3ZCN5 2332 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 PPEF2O14830 753 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 LAMTOR5O43504 91 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 PIGRP01833 764 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 ADRB2P07550 413 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 CYP3A5P20815 502 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 MATR3P43243 847 aaKnown RBP eCLIP20.48■□□□□ 0.87
ABCA3-204ENST00000566200 FOXK2Q01167 660 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 YWHAHQ04917 246 aaPredicted RBP20.48■□□□□ 0.87
ABCA3-204ENST00000566200 CYP4A22Q5TCH4 519 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 SLC39A4Q6P5W5 647 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 GPBP1Q86WP2 473 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 MAP4K3Q8IVH8 894 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 KIAA2013Q8IYS2 634 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 BICD1Q96G01 975 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 PGLYRP2Q96PD5 576 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 FIZ1Q96SL8 496 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 LRRC3Q9BY71 257 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 ZFP14Q9HCL3 533 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 TBX20Q9UMR3 447 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 UBQLN1Q9UMX0 589 aaKnown RBP20.48■□□□□ 0.87
ABCA3-204ENST00000566200 YIPF1Q9Y548 306 aa20.48■□□□□ 0.87
ABCA3-204ENST00000566200 H3BQV1 296 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 MYL4P12829 197 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 MARCKSP29966 332 aaPredicted RBP20.47■□□□□ 0.87
ABCA3-204ENST00000566200 VIPR2P41587 438 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 MAGEA9P43362 315 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 RPS9P46781 194 aaKnown RBP20.47■□□□□ 0.87
ABCA3-204ENST00000566200 LIG4P49917 911 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 ZNF131P52739 623 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 CSTF1Q05048 431 aaKnown RBP20.47■□□□□ 0.87
ABCA3-204ENST00000566200 PPP2R3AQ06190 1150 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 ZNF852Q6ZMS4 543 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 SHKBP1Q8TBC3 707 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 NELL1Q92832 810 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 SMARCD2Q92925 531 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 RMDN1Q96DB5 314 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 AK8Q96MA6 479 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 ZNF512Q96ME7 567 aaPredicted RBP20.47■□□□□ 0.87
ABCA3-204ENST00000566200 NELL2Q99435 816 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 TRMT61BQ9BVS5 477 aaKnown RBP20.47■□□□□ 0.87
ABCA3-204ENST00000566200 DNAJC25Q9H1X3 360 aa20.47■□□□□ 0.87
ABCA3-204ENST00000566200 DNAH14Q0VDD8 3507 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 H0YCG3 227 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 OGTO15294 1046 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 SLC26A4O43511 780 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 DHX8Q14562 1220 aaKnown RBP20.46■□□□□ 0.87
ABCA3-204ENST00000566200 TEAD2Q15562 447 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 IQCEQ6IPM2 695 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 TSSK4Q6SA08 328 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 ERMP1Q7Z2K6 904 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 TMC8Q8IU68 726 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 ELMOD1Q8N336 334 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 ZSCAN18Q8TBC5 510 aaPredicted RBP20.46■□□□□ 0.87
ABCA3-204ENST00000566200 RUBCNQ92622 972 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 RSPRY1Q96DX4 576 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 BRD9Q9H8M2 597 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 TRPV4Q9HBA0 871 aa20.46■□□□□ 0.87
ABCA3-204ENST00000566200 ZNF334Q9HCZ1 680 aaPredicted RBP20.46■□□□□ 0.87
ABCA3-204ENST00000566200 A0A0B4J269 797 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 K7ENM7 598 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 HNRNPDLO14979 420 aaKnown RBP20.45■□□□□ 0.86
ABCA3-204ENST00000566200 SPTLC1O15269 473 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
ABCA3-204ENST00000566200 PLCG1P19174 1290 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 DUSP4Q13115 394 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 MCM6Q14566 821 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 KARSQ15046 597 aaKnown RBP20.45■□□□□ 0.86
ABCA3-204ENST00000566200 SPATA1Q5VX52 437 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 MYCT1Q8N699 235 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 TTC9BQ8N6N2 239 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 LEMD2Q8NC56 503 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 ZBTB44Q8NCP5 570 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 TMEM209Q96SK2 561 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 PRMT8Q9NR22 394 aaPredicted RBP20.45■□□□□ 0.86
ABCA3-204ENST00000566200 ASAH2Q9NR71 780 aa20.45■□□□□ 0.86
ABCA3-204ENST00000566200 CPSF3Q9UKF6 684 aaKnown RBP20.45■□□□□ 0.86
ABCA3-204ENST00000566200 OR6C75A6NL08 312 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 TISP43B9A030 160 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 ARNTLO00327 626 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 LILRB5O75023 590 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 PSMC3P17980 439 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 GDI1P31150 447 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 UBA7P41226 1012 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 LILRA4P59901 499 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 MTAPQ13126 283 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 GPR17Q13304 367 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 JADE1Q6IE81 842 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 CENPPQ6IPU0 288 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 RAD54LQ92698 747 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 CALML4Q96GE6 196 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 RPF1Q9H9Y2 349 aaKnown RBP20.44■□□□□ 0.86
ABCA3-204ENST00000566200 PARVGQ9HBI0 331 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 TRPV5Q9NQA5 729 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 NDRG2Q9UN36 371 aaKnown RBP20.44■□□□□ 0.86
ABCA3-204ENST00000566200 PCDHGA2Q9Y5H1 932 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.44■□□□□ 0.86
ABCA3-204ENST00000566200 SCN1AP35498 2009 aa20.44■□□□□ 0.86
ABCA3-204ENST00000566200 ANKRD63C9JTQ0 380 aa20.43■□□□□ 0.86
ABCA3-204ENST00000566200 NCAM2O15394 837 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms