RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ACAP3Q96P50 834 aa13.97□□□□□ -0.17
RNF40-208ENST00000565995 KIFC3Q9BVG8 833 aa13.97□□□□□ -0.17
RNF40-208ENST00000565995 OXCT2Q9BYC2 517 aaPredicted RBP13.97□□□□□ -0.17
RNF40-208ENST00000565995 ASAH2Q9NR71 780 aa13.97□□□□□ -0.17
RNF40-208ENST00000565995 CEP192Q8TEP8 1941 aa13.97□□□□□ -0.17
RNF40-208ENST00000565995 ASPMQ8IZT6 3477 aa13.97□□□□□ -0.17
RNF40-208ENST00000565995 HELZP42694 1942 aaKnown RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 CHURC1-FNTBB4DL54 471 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 M0QZQ0 153 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 MEFVO15553 781 aaPredicted RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 GDF9O60383 454 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 OAZ2O95190 189 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 VNN2O95498 520 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 MCF2P10911 925 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 LIG1P18858 919 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 WEE1P30291 646 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 FNTBP49356 437 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 SHC2P98077 582 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 TWF1Q12792 350 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 ECM1Q16610 540 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 ZNF280DQ6N043 979 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 WDR5BQ86VZ2 330 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 FAM160A2Q8N612 972 aaPredicted RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 NSUN7Q8NE18 718 aaKnown RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 APPL2Q8NEU8 664 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 SHKBP1Q8TBC3 707 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 CSGALNACT1Q8TDX6 532 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 RSPRY1Q96DX4 576 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 LOXL4Q96JB6 756 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.17
RNF40-208ENST00000565995 ARHGAP28Q9P2N2 729 aa13.96□□□□□ -0.17
RNF40-208ENST00000565995 PI4KAP42356 2102 aa13.96□□□□□ -0.18
RNF40-208ENST00000565995 WDFY3Q8IZQ1 3526 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 CCDC163A0A0D9SF12 145 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 PMLP29590 882 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 MCM7P33993 719 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 NPTX2P47972 431 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 ARPP19P56211 112 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 ANAPC15P60006 121 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 CCINQ13939 588 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 PDIA5Q14554 519 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 TEAD2Q15562 447 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 ME3Q16798 604 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 RNF19BQ6ZMZ0 732 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.95□□□□□ -0.18
RNF40-208ENST00000565995 TMC8Q8IU68 726 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 TBC1D32Q96NH3 1257 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 MKNK1Q9BUB5 465 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
RNF40-208ENST00000565995 BHMT2Q9H2M3 363 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
RNF40-208ENST00000565995 NUB1Q9Y5A7 615 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 BAHCC1Q9P281 2608 aa13.95□□□□□ -0.18
RNF40-208ENST00000565995 ABCA7Q8IZY2 2146 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 SPECC1L-ADORA2AF8WAN1 911 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 OR52Z1P0C646 297 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 ZNF806P0C7X5 589 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 MYL4P12829 197 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 GJA1P17302 382 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 CTHP32929 405 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 AARSP49588 968 aaKnown RBP eCLIP13.94□□□□□ -0.18
RNF40-208ENST00000565995 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
RNF40-208ENST00000565995 SRSF5Q13243 272 aaKnown RBP13.94□□□□□ -0.18
RNF40-208ENST00000565995 PLD1Q13393 1074 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 SLC10A6Q3KNW5 377 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 DAW1Q8N136 415 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 C18orf25Q96B23 403 aaPredicted RBP13.94□□□□□ -0.18
RNF40-208ENST00000565995 LRRC3BQ96PB8 259 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 DNAJC25Q9H1X3 360 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 HSFX1Q9UBD0 423 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 ASB3Q9Y575 518 aa13.94□□□□□ -0.18
RNF40-208ENST00000565995 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.94□□□□□ -0.18
RNF40-208ENST00000565995 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
RNF40-208ENST00000565995 PCNX2A6NKB5 2137 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 LARGE1O95461 756 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 LRPAP1P30533 357 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 PEX3P56589 373 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 OSTNP61366 133 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 GPR17Q13304 367 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 TRIM29Q14134 588 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 ZBTB6Q15916 424 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 ARHGAP29Q52LW3 1261 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 ARID3BQ8IVW6 561 aaPredicted RBP13.93□□□□□ -0.18
RNF40-208ENST00000565995 YAF2Q8IY57 180 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 TARS2Q9BW92 718 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms