RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 KLK14Q9P0G3 267 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 FBXO2Q9UK22 296 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 VAV3Q9UKW4 847 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SMG5Q9UPR3 1016 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 AKAP13Q12802 2813 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 C2orf71A6NGG8 1288 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PCNX2A6NKB5 2137 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 SRRM3A6NNA2 597 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 IPO5O00410 1097 aaKnown RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 BAG4O95429 457 aaKnown RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 SRGAP2BP0DMP2 458 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 MARK3P27448 753 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PMLP29590 882 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 HOXC13P31276 330 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 ADAM17P78536 824 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 ATP2C1P98194 919 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 ITIH3Q06033 890 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 EHHADHQ08426 723 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 SNW1Q13573 536 aaKnown RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 MTMR1Q13613 665 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 CALCRLQ16602 461 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 COX20Q5RI15 118 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 C16orf46Q6P387 395 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 TRMT1LQ7Z2T5 733 aaKnown RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 KCNK18Q7Z418 384 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 BRAPQ7Z569 592 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 TP53INP1Q96A56 240 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 GPRASP2Q96D09 838 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 NECTIN4Q96NY8 510 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PPP1R16BQ96T49 567 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 LPIN3Q9BQK8 851 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 ZNF577Q9BSK1 485 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 MAF1Q9H063 256 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 CSRNP2Q9H175 543 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 TTC12Q9H892 705 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-204ENST00000565634 BRMS1Q9HCU9 246 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 RXFP3Q9NSD7 469 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 WNT16Q9UBV4 365 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PADI3Q9ULW8 664 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PCDHA7Q9UN72 937 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 KIF3AQ9Y496 699 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 PCDHB7Q9Y5E2 793 aa6.84□□□□□ -1.31
UBFD1-204ENST00000565634 GREB1Q4ZG55 1949 aa6.84□□□□□ -1.32
UBFD1-204ENST00000565634 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 LOC102724159A0A0B4J2E5 919 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 VWA3AA6NCI4 1184 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 B4DLN1 442 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 SPTLC2O15270 562 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 FIBPO43427 364 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 LAMTOR5O43504 91 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 CHMP2AO43633 222 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 ZNF862O60290 1169 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 MED24O75448 989 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 STAG3L1P0CL83 205 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 CPB1P15086 417 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 TARSP26639 723 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 HOXC8P31273 242 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 IDH3AP50213 366 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 ACTR2P61160 394 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 NUCB2P80303 420 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 SRSF5Q13243 272 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 PWP2Q15269 919 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 PTPN14Q15678 1187 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 SOWAHCQ53LP3 525 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 RILPL1Q5EBL4 403 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 KIAA1841Q6NSI8 718 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 SWSAP1Q6NVH7 229 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 XRRA1Q6P2D8 792 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 SHC4Q6S5L8 630 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 UNQ6494/PRO21346Q6UXR6 183 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 ABHD15Q6UXT9 468 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 NIPA1Q7RTP0 329 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 NLRX1Q86UT6 975 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 MRPL43Q8N983 215 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 ACSF2Q96CM8 615 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 IFT43Q96FT9 208 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 DYDC2Q96IM9 177 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 MYADMQ96S97 322 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 GPR20Q99678 358 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 GOLPH3LQ9H4A5 285 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 PUF60Q9UHX1 559 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 GINS2Q9Y248 185 aa6.83□□□□□ -1.32
UBFD1-204ENST00000565634 DSPP15924 2871 aaKnown RBP6.83□□□□□ -1.32
UBFD1-204ENST00000565634 F5P12259 2224 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 GON4LQ3T8J9 2241 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 CEP295Q9C0D2 2601 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 GIPC1O14908 333 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 HYAL3O43820 417 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 NEMFO60524 1076 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 PRPF40AO75400 957 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms