RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ZSCAN12O43309 604 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 LRRN2O75325 713 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 STAU1O95793 577 aaKnown RBP20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 CST3P01034 146 aaPredicted RBP20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 CA3P07451 260 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 ITGA4P13612 1032 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 CYP3A5P20815 502 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 NOP14P78316 857 aaKnown RBP20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 RBP5P82980 135 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 KLHL30Q0D2K2 578 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 ARHGAP44Q17R89 818 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 E4F1Q66K89 784 aaPredicted RBP20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 HGSNATQ68CP4 663 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 RAD9BQ6WBX8 426 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 IRF2BP2Q7Z5L9 587 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 C1orf127Q8N9H9 656 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 BEST2Q8NFU1 509 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 SHC3Q92529 594 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 TATDN2Q93075 761 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 PGBD4Q96DM1 585 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 GPR88Q9GZN0 384 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 VRTNQ9H8Y1 702 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 UBN1Q9NPG3 1134 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 DPP3Q9NY33 737 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 ARHGAP20Q9P2F6 1191 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 GIT1Q9Y2X7 761 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 HES2Q9Y543 173 aa20.49■□□□□ 0.87
CSPG4P13-201ENST00000565545 A0A0U1RQF3 1178 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 RFXAPO00287 272 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 NDUFA10O95299 355 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 AKAP5P24588 427 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 RFC2P35250 354 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 FAM84AQ96KN4 292 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 KREMEN1Q96MU8 473 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 NECAB3Q96P71 396 aaPredicted RBP20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 PI4K2AQ9BTU6 479 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 APOL6Q9BWW8 343 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 RAPGEFL1Q9UHV5 662 aa20.48■□□□□ 0.87
CSPG4P13-201ENST00000565545 EIF3CLB5ME19 914 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 FOXN3O00409 490 aaPredicted RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 GFPT2O94808 682 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 IPO7O95373 1038 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 CCDC175P0C221 793 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 EIF4A3P38919 411 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 MYL6P60660 151 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 KRT83P78385 493 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 TFF2Q03403 129 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 CUL2Q13617 745 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 TDRD12Q587J7 1177 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 VPS36Q86VN1 386 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 FAM71AQ8IYT1 594 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 CCAR2Q8N163 923 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 APBB2Q92870 758 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 SLC9A7Q96T83 725 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 EIF3CQ99613 913 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 ADAM2Q99965 735 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 IFIH1Q9BYX4 1025 aaKnown RBP20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 DEF6Q9H4E7 631 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 RGS18Q9NS28 235 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 SIX4Q9UIU6 781 aa20.47■□□□□ 0.87
CSPG4P13-201ENST00000565545 TANC1Q9C0D5 1861 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 GOLGA6L9A6NEM1 432 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 AKR1B10O60218 316 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 ITGB3P05106 788 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 KRT19P08727 400 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 BMP1P13497 986 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 YWHAEP62258 255 aaKnown RBP20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 MTF1Q14872 753 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 ZNF699Q32M78 642 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 CXorf38Q8TB03 319 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 PHOSPHO2Q8TCD6 241 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 ZMAT2Q96NC0 199 aaKnown RBP20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 NIF3L1Q9GZT8 377 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 XYLT2Q9H1B5 865 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 FAM124BQ9H5Z6 455 aaPredicted RBP20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 HAUS4Q9H6D7 363 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 APOBEC3GQ9HC16 384 aaKnown RBP20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 SLC38A7Q9NVC3 462 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 PPP2R2CQ9Y2T4 447 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 NUB1Q9Y5A7 615 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 ADGRG1Q9Y653 693 aa20.46■□□□□ 0.87
CSPG4P13-201ENST00000565545 MGEA5O60502 916 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 OFD1O75665 1012 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 LCA5LO95447 670 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 EOMESO95936 686 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 P4HA1P13674 534 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 ARID5AQ03989 594 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 SPA17Q15506 151 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 ASTE1Q2TB18 679 aaPredicted RBP20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF667Q5HYK9 610 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 TOGARAM2Q6ZUX3 1019 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 ARNTL2Q8WYA1 636 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 KAT5Q92993 513 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 SPTLC3Q9NUV7 552 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 AGAP1Q9UPQ3 857 aa20.45■□□□□ 0.86
CSPG4P13-201ENST00000565545 MTCH2Q9Y6C9 303 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms