RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 EML1O00423 815 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 SYN3O14994 580 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 N4BP3O15049 544 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 TBX3O15119 743 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 RECQL4O94761 1208 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 REC8O95072 547 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 EGFP01133 1207 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 PRKCBP05771 671 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ENGP17813 658 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 IGFBP6P24592 240 aaPredicted RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 WEE1P30291 646 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 GALK1P51570 392 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 EPHB3P54753 998 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CYP4A11Q02928 519 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 RUNX3Q13761 415 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 TRIP6Q15654 476 aaKnown RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CTXN3Q4LDR2 81 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ARHGAP15Q53QZ3 475 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 PPP4R3AQ6IN85 833 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CD300LGQ6UXG3 332 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 LPCAT2Q7L5N7 544 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 SYT12Q8IV01 421 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CCDC148Q8NFR7 591 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 TBCKQ8TEA7 893 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ADAMTS14Q8WXS8 1223 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ATXN3LQ9H3M9 355 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 ZSWIM4Q9H7M6 989 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 POLR3BQ9NW08 1133 aaPredicted RBP9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 FBXL5Q9UKA1 691 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 RAI2Q9Y5P3 530 aa9.95□□□□□ -0.82
VPS9D1-205ENST00000565452 CYSRT1A8MQ03 144 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 PRPF3O43395 683 aaKnown RBP9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 OPHN1O60890 802 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 PRB1P04280 392 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 PLA2G2AP14555 144 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 MARCKSP29966 332 aaPredicted RBP9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 CDC27P30260 824 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 ARL2P36404 184 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 BRCC3P46736 316 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 ALDH1A3P47895 512 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 MCM2P49736 904 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 PPP2R5CQ13362 524 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 CAPSQ13938 189 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 EPHA7Q15375 998 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 MAPK6Q16659 721 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 LARP1BQ659C4 914 aaKnown RBP9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 SLC23A3Q6PIS1 610 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 APPL2Q8NEU8 664 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 TSTD1Q8NFU3 115 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 RPLP0P6Q8NHW5 317 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 CEP76Q8TAP6 659 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 ETNPPLQ8TBG4 499 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 MDM1Q8TC05 714 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 FAM20AQ96MK3 541 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 IGSF5Q9NSI5 407 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 GDAQ9Y2T3 454 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 ASB3Q9Y575 518 aa9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 URB1O60287 2271 aaKnown RBP9.94□□□□□ -0.82
VPS9D1-205ENST00000565452 CACNA1EQ15878 2313 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 CAPN8A6NHC0 703 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 MARCH6O60337 910 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 DGAT1O75907 488 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 GLRA2P23416 452 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 RCAN1P53805 252 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 NLRP5P59047 1200 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 FAM193AP78312 1265 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 GFPT1Q06210 699 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 PSMD2Q13200 908 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 FAM187BQ17R55 369 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 SPDYCQ5MJ68 293 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 GPR158Q5T848 1215 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 RNF20Q5VTR2 975 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 MOXD1Q6UVY6 613 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 PPP4R3CPQ6ZMV5 832 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 DNAJB7Q7Z6W7 309 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 LURAP1LQ8IV03 231 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 NOSTRINQ8IVI9 506 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 TPH2Q8IWU9 490 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 ASAP3Q8TDY4 903 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 PPP1R10Q96QC0 940 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 P2RY13Q9BPV8 354 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 FAM83CQ9BQN1 747 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 LXNQ9BS40 222 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 GTPBP2Q9BX10 602 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 CXCL16Q9H2A7 254 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 FZD8Q9H461 694 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 TASP1Q9H6P5 420 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 FBRSL1Q9HCM7 1045 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 XPNPEP1Q9NQW7 623 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms