RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PPEF2O14830 753 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 SLC26A4O43511 780 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 OR4Q2P0C623 313 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 GJA1P17302 382 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 MARCKSP29966 332 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 GRM2Q14416 872 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 CYP4A22Q5TCH4 519 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZC3H14Q6PJT7 736 aaKnown RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 VITQ6UXI7 678 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF852Q6ZMS4 543 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 TMC8Q8IU68 726 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZBTB44Q8NCP5 570 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 SMARCD2Q92925 531 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF512Q96ME7 567 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 TSPAN18Q96SJ8 248 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 TRMT61BQ9BVS5 477 aaKnown RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 DNAJC25Q9H1X3 360 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF334Q9HCZ1 680 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 TRPV5Q9NQA5 729 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 SPATA6Q9NWH7 488 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 UBQLN1Q9UMX0 589 aaKnown RBP9.34□□□□□ -0.91
CAPN3-213ENST00000565173 MIA3Q5JRA6 1907 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 MYH11P35749 1972 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 PATJQ8NI35 1801 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 GPR179Q6PRD1 2367 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 H3BQV1 296 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 ARNTLO00327 626 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 SPTLC1O15269 473 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 OGTO15294 1046 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 LAMTOR5O43504 91 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 TDGF1P13385 188 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 CPB1P15086 417 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 SCP2P22307 547 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 UBA7P41226 1012 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 VIPR2P41587 438 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
CAPN3-213ENST00000565173 MAGEA9P43362 315 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 LILRA4P59901 499 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 GTF2BQ00403 316 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 CSTF1Q05048 431 aaKnown RBP9.33□□□□□ -0.92
CAPN3-213ENST00000565173 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 DUSP4Q13115 394 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 GPR17Q13304 367 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 DHX8Q14562 1220 aaKnown RBP9.33□□□□□ -0.92
CAPN3-213ENST00000565173 MCM6Q14566 821 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 KYAT1Q16773 422 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 SPATA1Q5VX52 437 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 IQCEQ6IPM2 695 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 CENPPQ6IPU0 288 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 KIAA2013Q8IYS2 634 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 DCLK2Q8N568 766 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 MYCT1Q8N699 235 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 LEMD2Q8NC56 503 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 SHKBP1Q8TBC3 707 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 RUBCNQ92622 972 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 DNASE1L2Q92874 299 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 RMDN1Q96DB5 314 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 RSPRY1Q96DX4 576 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 BICD1Q96G01 975 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 BORCS6Q96GS4 357 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 CDK5RAP3Q96JB5 506 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 LRRC3BQ96PB8 259 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 PGLYRP2Q96PD5 576 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 TMEM209Q96SK2 561 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 BRD9Q9H8M2 597 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
CAPN3-213ENST00000565173 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 COL4A2P08572 1712 aa9.33□□□□□ -0.92
CAPN3-213ENST00000565173 ANO9A1A5B4 782 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 OR6C75A6NL08 312 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 ANKRD63C9JTQ0 380 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PIRO00625 290 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 NCAM2O15394 837 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 TRAK2O60296 914 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 LILRB5O75023 590 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MYL4P12829 197 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PSMC3P17980 439 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PLCG1P19174 1290 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 TYMPP19971 482 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 NMT1P30419 496 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 GDI1P31150 447 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 LONP1P36776 959 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 LIG4P49917 911 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MTAPQ13126 283 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 TEAD2Q15562 447 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 C9orf57Q5W0N0 161 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms