RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TDRD12Q587J7 1177 aaKnown RBP13.74□□□□□ -0.21
CLK3-214ENST00000564096 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 VPS36Q86VN1 386 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 CXorf38Q8TB03 319 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 SHC3Q92529 594 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
CLK3-214ENST00000564096 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
CLK3-214ENST00000564096 SCN5AQ14524 2016 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 IPO7O95373 1038 aaKnown RBP13.73□□□□□ -0.21
CLK3-214ENST00000564096 KRT5P13647 590 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 SYN1P17600 705 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 ANXA13P27216 316 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 USP8P40818 1118 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 PDE6CP51160 858 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 BPIFB4P59827 614 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 CDK17Q00537 523 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 DSC1Q08554 894 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 NAB2Q15742 525 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 MEA1Q16626 185 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.73□□□□□ -0.215e-12■■□□□ 14.3
CLK3-214ENST00000564096 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 TATDN2Q93075 761 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 KREMEN1Q96MU8 473 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 MMS19Q96T76 1030 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 SLC9A7Q96T83 725 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 TMEM175Q9BSA9 504 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 BCO2Q9BYV7 579 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 DEF6Q9H4E7 631 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
CLK3-214ENST00000564096 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
CLK3-214ENST00000564096 MICAL3Q7RTP6 2002 aa13.73□□□□□ -0.21
CLK3-214ENST00000564096 ALPK3Q96L96 1907 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 KPNA7A9QM74 516 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 ARHGAP6O43182 974 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 HUS1O60921 280 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 GFPT2O94808 682 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 UPP2O95045 317 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 SERPING1P05155 500 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 ODC1P11926 461 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 CLCNKBP51801 687 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 UPP1Q16831 310 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 CMTR2Q8IYT2 770 aaKnown RBP13.72□□□□□ -0.21
CLK3-214ENST00000564096 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 KAT5Q92993 513 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 VWCEQ96DN2 955 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 ARID3AQ99856 593 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 GDAP2Q9NXN4 497 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 DSEQ9UL01 958 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
CLK3-214ENST00000564096 TMEM189-UBE2V1I3L0A0 370 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 PPEF2O14830 753 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 TRAPPC3O43617 180 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DGKIO75912 1065 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 B3GAT3O94766 335 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 SKILP12757 684 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 CD58P19256 250 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 FECHP22830 423 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 CYLC1P35663 651 aaPredicted RBP13.71□□□□□ -0.21
CLK3-214ENST00000564096 PRKCIP41743 596 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 OR1G1P47890 313 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.21
CLK3-214ENST00000564096 LILRA4P59901 499 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DEFB103AP81534 67 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 ARID5AQ03989 594 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DCLRE1AQ6PJP8 1040 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 FAM71AQ8IYT1 594 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 RBBP8NLQ8NC74 664 aaPredicted RBP13.71□□□□□ -0.21
CLK3-214ENST00000564096 SPATA18Q8TC71 538 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 SMYD3Q9H7B4 428 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 POLIQ9UNA4 740 aa13.71□□□□□ -0.21
CLK3-214ENST00000564096 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.22
CLK3-214ENST00000564096 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
CLK3-214ENST00000564096 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms