RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 KCND2Q9NZV8 630 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 TUBGCP4Q9UGJ1 667 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 GMEB2Q9UKD1 530 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 PIAS3Q9Y6X2 628 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 COL4A3Q01955 1670 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 CEP250Q9BV73 2442 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 MAPTP10636 758 aaKnown RBP22.75■■□□□ 1.23
HERC2-204ENST00000563945 GJA1P17302 382 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 VIPR2P41587 438 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 ALDH1A3P47895 512 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 PPP2R3AQ06190 1150 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 MCL1Q07820 350 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 IL17AQ16552 155 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 RILPL1Q5EBL4 403 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 ERICH6BQ5W0A0 696 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 POTEHQ6S545 545 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 VITQ6UXI7 678 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 MFSD6LQ8IWD5 586 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 SYT2Q8N9I0 419 aaPredicted RBP22.75■■□□□ 1.23
HERC2-204ENST00000563945 ZSWIM3Q96MP5 696 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 IER2Q9BTL4 223 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 MMTAG2Q9BU76 263 aaKnown RBP22.75■■□□□ 1.23
HERC2-204ENST00000563945 EPC1Q9H2F5 836 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 TRPV5Q9NQA5 729 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 PRMT8Q9NR22 394 aaPredicted RBP22.75■■□□□ 1.23
HERC2-204ENST00000563945 DLL3Q9NYJ7 618 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 USP18Q9UMW8 372 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 UBQLN1Q9UMX0 589 aaKnown RBP22.75■■□□□ 1.23
HERC2-204ENST00000563945 GPR179Q6PRD1 2367 aa22.75■■□□□ 1.23
HERC2-204ENST00000563945 MED19A0JLT2 244 aaPredicted RBP22.74■■□□□ 1.23
HERC2-204ENST00000563945 PLA2G4BP0C869 781 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 CXCL8P10145 99 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 SPAG1Q07617 926 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 TEAD2Q15562 447 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 MAP4K3Q8IVH8 894 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 CHRDQ9H2X0 955 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 YIPF1Q9Y548 306 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 TIMM13Q9Y5L4 95 aaPredicted RBP22.74■■□□□ 1.23
HERC2-204ENST00000563945 F5P12259 2224 aa22.74■■□□□ 1.23
HERC2-204ENST00000563945 OR6C75A6NL08 312 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 PRR5-ARHGAP8B1AHC4 643 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 M0QZQ0 153 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 LILRB5O75023 590 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 OAZ2O95190 189 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 CYP3A5P20815 502 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 LIG4P49917 911 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 CCR3P51677 355 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 ARHGAP8P85298 464 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 FZD5Q13467 585 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 ARMCX5Q6P1M9 558 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 NELL1Q92832 810 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 PGLYRP2Q96PD5 576 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 RPF1Q9H9Y2 349 aaKnown RBP22.73■■□□□ 1.23
HERC2-204ENST00000563945 TRPV4Q9HBA0 871 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 PATJQ8NI35 1801 aa22.73■■□□□ 1.23
HERC2-204ENST00000563945 VWA3AA6NCI4 1184 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 HEPACAM2A8MVW5 462 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 DPYSL4O14531 572 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 LRPAP1P30533 357 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 KPNA1P52294 538 aaPredicted RBP22.72■■□□□ 1.23
HERC2-204ENST00000563945 EPHA5P54756 1037 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 LMNB2Q03252 620 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 DUSP4Q13115 394 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 HYIQ5T013 277 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 FAM200AQ8TCP9 573 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 FAM212AQ96EL1 285 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 PNMA5Q96PV4 448 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 TSPAN18Q96SJ8 248 aa22.72■■□□□ 1.23
HERC2-204ENST00000563945 CDV3Q9UKY7 258 aaKnown RBP22.72■■□□□ 1.23
HERC2-204ENST00000563945 TTC26A0AVF1 554 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 H3BQV1 296 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 MEFVO15553 781 aaPredicted RBP22.71■■□□□ 1.23
HERC2-204ENST00000563945 MOSPD3O75425 235 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 CCNE1P24864 410 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 CXCL12P48061 93 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 ATP2C1P98194 919 aaPredicted RBP22.71■■□□□ 1.23
HERC2-204ENST00000563945 CACNB1Q02641 598 aaPredicted RBP22.71■■□□□ 1.23
HERC2-204ENST00000563945 GPR17Q13304 367 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 C1orf228Q6PIY5 440 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 MAMSTRQ6ZN01 415 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 HAUS6Q7Z4H7 955 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 SHKBP1Q8TBC3 707 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 MSANTD3Q96H12 275 aa22.71■■□□□ 1.23
HERC2-204ENST00000563945 A0A1W2PRU2 124 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 LACTBL1A8MY62 500 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 HNRNPDLO14979 420 aaKnown RBP22.7■■□□□ 1.22
HERC2-204ENST00000563945 FGF19O95750 216 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 OR4Q2P0C623 313 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 SCP2P22307 547 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 SLC12A3P55017 1021 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 LRRC32Q14392 662 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 OVOS1Q6IE37 1185 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 CELF5Q8N6W0 485 aaKnown RBP22.7■■□□□ 1.22
HERC2-204ENST00000563945 BEST2Q8NFU1 509 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 CALML4Q96GE6 196 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 C8orf33Q9H7E9 229 aaPredicted RBP22.7■■□□□ 1.22
HERC2-204ENST00000563945 ASB3Q9Y575 518 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 MYH11P35749 1972 aa22.7■■□□□ 1.22
HERC2-204ENST00000563945 NPHP3-ACAD11A0A0J9YXS1 232 aa22.69■■□□□ 1.22
HERC2-204ENST00000563945 SHISA7A6NL88 538 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms