RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 MYL4P12829 197 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 CPB1P15086 417 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 MTAPQ13126 283 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 SHKBP1Q8TBC3 707 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 SMARCD2Q92925 531 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 KIF12Q96FN5 646 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 ZNF512Q96ME7 567 aaPredicted RBP18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 TRMT61BQ9BVS5 477 aaKnown RBP18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 LRRC3Q9BY71 257 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 BRD9Q9H8M2 597 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 ZNF334Q9HCZ1 680 aaPredicted RBP18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 MAFFQ9ULX9 164 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 NDRG2Q9UN36 371 aaKnown RBP18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 YIPF1Q9Y548 306 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 CEP250Q9BV73 2442 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 MYH11P35749 1972 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 MED19A0JLT2 244 aaPredicted RBP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 LACTBL1A8MY62 500 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 PPEF2O14830 753 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 SPTLC1O15269 473 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 CLTAP09496 248 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 TDGF1P13385 188 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 GDI1P31150 447 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 YWHAHQ04917 246 aaPredicted RBP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 TEAD2Q15562 447 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 ENOX2Q16206 610 aaKnown RBP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 IQCEQ6IPM2 695 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 HAUS6Q7Z4H7 955 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 TMC8Q8IU68 726 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 ELMOD1Q8N336 334 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 KCTD17Q8N5Z5 321 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 KCNN1Q92952 543 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 RSPRY1Q96DX4 576 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 PGLYRP2Q96PD5 576 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 TRPV4Q9HBA0 871 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 ASAH2Q9NR71 780 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 ZSCAN32Q9NX65 697 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 KCNG1Q9UIX4 513 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 MRPS17Q9Y2R5 130 aaKnown RBP18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 F5P12259 2224 aa18.29■□□□□ 0.52
HDGFL3-203ENST00000563404 ARNTLO00327 626 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 NCAM2O15394 837 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 PSMC3P17980 439 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 CYP3A5P20815 502 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 ZSCAN18Q8TBC5 510 aaPredicted RBP18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 ATRIPQ8WXE1 791 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 IRF7Q92985 503 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 BICD1Q96G01 975 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 REEP2Q9BRK0 252 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 TRPV5Q9NQA5 729 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 DLL3Q9NYJ7 618 aa18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
HDGFL3-203ENST00000563404 MAN2B1O00754 1011 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 ADRB2P07550 413 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 DUSP4Q13115 394 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 ARL6IP4Q66PJ3 421 aaKnown RBP18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 SLC39A4Q6P5W5 647 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 DGLUCYQ7Z3D6 616 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 BORCS6Q96GS4 357 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 TMEM209Q96SK2 561 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 EPC1Q9H2F5 836 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 CHRDQ9H2X0 955 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 LARSQ9P2J5 1176 aaKnown RBP18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 TBX20Q9UMR3 447 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 PIAS3Q9Y6X2 628 aa18.27■□□□□ 0.52
HDGFL3-203ENST00000563404 TICRRQ7Z2Z1 1910 aa18.27■□□□□ 0.51
HDGFL3-203ENST00000563404 A0A1W2PRU2 124 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 HEPACAM2A8MVW5 462 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 PIGRP01833 764 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 GJB2P29033 226 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 GRIN1Q05586 938 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 PPP2R3AQ06190 1150 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 GPR17Q13304 367 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 DSTYKQ6XUX3 929 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 MFSD6LQ8IWD5 586 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 TTC9BQ8N6N2 239 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 LEMD2Q8NC56 503 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 FAM3CQ92520 227 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 CDK5RAP3Q96JB5 506 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 FIZ1Q96SL8 496 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 BLOC1S4Q9NUP1 217 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 ODF2LQ9ULJ1 636 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 SMG5Q9UPR3 1016 aaKnown RBP18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
HDGFL3-203ENST00000563404 A0A0B4J269 797 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 MTMR11A4FU01 709 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 OR6C75A6NL08 312 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 H0YCG3 227 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 HNRNPDLO14979 420 aaKnown RBP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 OGTO15294 1046 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms