RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SRBD1Q8N5C6 995 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 TMEM145Q8NBT3 493 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 LILRB4Q8NHJ6 448 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 NXPE3Q969Y0 559 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 CCDC43Q96MW1 224 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 SAMD11Q96NU1 681 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TXN2Q99757 166 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 PHACTR1Q9C0D0 580 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ISCUQ9H1K1 167 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 NRIP3Q9NQ35 241 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 CNTLNQ9NXG0 1405 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 H2AFY2Q9P0M6 372 aaPredicted RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 FBXO40Q9UH90 709 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 LIMCH1Q9UPQ0 1083 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 C15orf41Q9Y2V0 281 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 DTNAQ9Y4J8 743 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TCRBV16S1A1N1A0A5B0 115 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 F8W8V4 182 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 DIAPH2O60879 1101 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 EFCAB14O75071 495 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 FLOT1O75955 427 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 SRGAP2CP0DJJ0 459 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 HPGDP15428 266 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ENDOUP21128 410 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 RFC4P35249 363 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 MAGEA10P43363 369 aaPredicted RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 CARD18P57730 90 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ACTR1AP61163 376 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TUBA1BP68363 451 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 CREB5Q02930 508 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TLE2Q04725 743 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ZNF543Q08ER8 600 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 DOC2AQ14183 400 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 INTS3Q68E01 1043 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 TRAT1Q6PIZ9 186 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TUBA1AQ71U36 451 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 HOOK3Q86VS8 718 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 DENND6BQ8NEG7 585 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TRIM58Q8NG06 486 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 ETNPPLQ8TBG4 499 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 GATAD2BQ8WXI9 593 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 IFT43Q96FT9 208 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 LTV1Q96GA3 475 aaPredicted RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 RBM17Q96I25 401 aaKnown RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 WNK4Q96J92 1243 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 NLRP4Q96MN2 994 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 SLC2A13Q96QE2 648 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 STRA6Q9BX79 667 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TTC12Q9H892 705 aaPredicted RBP5.11□□□□□ -1.59
SMG1-207ENST00000563235 SNX15Q9NRS6 342 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 EXTL2Q9UBQ6 330 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 BAG5Q9UL15 447 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 SLC39A10Q9ULF5 831 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 PCDHB14Q9Y5E9 798 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 PIAS3Q9Y6X2 628 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 NHSL1Q5SYE7 1610 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 LRRC7Q96NW7 1537 aa5.11□□□□□ -1.59
SMG1-207ENST00000563235 TRAV20A0A0B4J274 112 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 GOLGA6L7A0A1B0GV03 622 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 A4D1N5 150 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 LRRIQ4A6NIV6 560 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 PRR5-ARHGAP8B1AHC4 643 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 EREGO14944 169 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 TSPAN1O60635 241 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 PEX11AO75192 247 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 CFBP00751 764 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 ALOX15P16050 662 aaPredicted RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 SFPQP23246 707 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMG1-207ENST00000563235 CCR1P32246 355 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 MLH1P40692 756 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 CCT4P50991 539 aaKnown RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 PTK2BQ14289 1009 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 ZACNQ401N2 412 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 WDR93Q6P2C0 686 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 PPP1R21Q6ZMI0 780 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 ZBTB33Q86T24 672 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 LUZP1Q86V48 1076 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SCUBE1Q8IWY4 988 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 CD302Q8IX05 232 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SLC5A11Q8WWX8 675 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 CUL5Q93034 780 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 PHKBQ93100 1093 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 OSBP2Q969R2 916 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 ZC3H10Q96K80 434 aaKnown RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 CDK5RAP1Q96SZ6 601 aaKnown RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 EDEM2Q9BV94 578 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 NUP62CLQ9H1M0 184 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SUV39H2Q9H5I1 410 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 TMEM160Q9NX00 188 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 DACH1Q9UI36 760 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SNX13Q9Y5W8 968 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 SHANK2Q9UPX8 1470 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 RAD50Q92878 1312 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 NCF1BA6NI72 391 aaPredicted RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 NCF1CA8MVU1 366 aaPredicted RBP5.1□□□□□ -1.59
SMG1-207ENST00000563235 CDC25CP30307 473 aa5.1□□□□□ -1.59
SMG1-207ENST00000563235 PRKAR1BP31321 381 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms