RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 CNTD1Q8N815 330 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 RIN2Q8WYP3 895 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 MARS2Q96GW9 593 aaKnown RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 PGBD1Q96JS3 809 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 ZNF48Q96MX3 618 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 BRINP2Q9C0B6 783 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 PRDM12Q9H4Q4 367 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 PCDH12Q9NPG4 1184 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 LANCL2Q9NS86 450 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 CCM2LQ9NUG4 571 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 DNAJC28Q9NX36 388 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 PADI4Q9UM07 663 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 AOX1Q06278 1338 aa4.21□□□□□ -1.73
HDGFL3-202ENST00000562702 PROM1O43490 865 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 MOSPD3O75425 235 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 SNHG28P0DPA3 235 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 SREBF1P36956 1147 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 CDKN1CP49918 316 aaPredicted RBP4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 GUCY2FP51841 1108 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 PTPRRQ15256 657 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 PTPROQ16827 1216 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 ANO4Q32M45 955 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 TOR2AQ5JU69 321 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 RUSC1-AS1Q66K80 236 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 OTUD7BQ6GQQ9 843 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 PRPF38AQ8NAV1 312 aaKnown RBP4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 TOR1AIP2Q8NFQ8 470 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 IFT122Q9HBG6 1241 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 TMEM140Q9NV12 185 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 ZBTB21Q9ULJ3 1066 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 BTBD3Q9Y2F9 522 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 SIK3Q9Y2K2 1263 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 ATRNL1Q5VV63 1379 aa4.21□□□□□ -1.74
HDGFL3-202ENST00000562702 INSIG1O15503 277 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 SLC6A2P23975 617 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 GPR3P46089 330 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 CDK17Q00537 523 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 SRSF2Q01130 221 aaKnown RBP4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 SYDE2Q5VT97 1194 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 KCNK18Q7Z418 384 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 NEK8Q86SG6 692 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 PQLC1Q8N2U9 271 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 FBXO18Q8NFZ0 1043 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 TSPEARQ8WU66 669 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 SSH1Q8WYL5 1049 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 FATE1Q969F0 183 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 ACE2Q9BYF1 805 aaPredicted RBP4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 ANLNQ9NQW6 1124 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 WWOXQ9NZC7 414 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 NEU2Q9Y3R4 380 aa4.2□□□□□ -1.74
HDGFL3-202ENST00000562702 A0A1W2PS29 197 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 CCDC78A2IDD5 438 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 TRIM75PA6NK02 468 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 NCLP19338 710 aaKnown RBP4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 EPHB2P29323 1055 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 MTNR1BP49286 362 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 RPS7P62081 194 aaKnown RBP4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 CCT2P78371 535 aaKnown RBP4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 FPGSQ05932 587 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 ITKQ08881 620 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 MTMR1Q13613 665 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 FAM50AQ14320 339 aaKnown RBP4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 ADRM1Q16186 407 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 ATP2B3Q16720 1220 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 SLC44A4Q53GD3 710 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 MUM1L1Q5H9M0 696 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 CLNKQ7Z7G1 428 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 CASKIN2Q8WXE0 1202 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 MTMR8Q96EF0 704 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 HMCESQ96FZ2 354 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 GREM2Q9H772 168 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 GPR45Q9Y5Y3 372 aa4.19□□□□□ -1.74
HDGFL3-202ENST00000562702 PRAMEF33A0A0G2JMD5 474 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 LINC00473A8K010 186 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 PRAMEF10O60809 474 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 KATNA1O75449 491 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 PRSS23O95084 383 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 NTN1O95631 604 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 TTLL1O95922 423 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 OSMP13725 252 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 IARSP41252 1262 aaKnown RBP4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 ALDH1A3P47895 512 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 MALLQ13021 153 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 RAPGEF1Q13905 1077 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 CLUL1Q15846 466 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 TMEM119Q4V9L6 283 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 SEM1Q6ZVN7 128 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 UBE3BQ7Z3V4 1068 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 TECPR1Q7Z6L1 1165 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 RASAL3Q86YV0 1011 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 TMEM125Q96AQ2 219 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 ADI1Q9BV57 179 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 FBXO34Q9NWN3 711 aa4.18□□□□□ -1.74
HDGFL3-202ENST00000562702 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms