RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ALDH1B1P30837 517 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ABL2P42684 1182 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 LMNB2Q03252 620 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 DMP1Q13316 513 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 FASTKD3Q14CZ7 662 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PDK4Q16654 411 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 UGCGQ16739 394 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 DACT2Q5SW24 774 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 DENND1AQ8TEH3 1009 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 TTC25Q96NG3 672 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 FHDC1Q9C0D6 1143 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 KMT5AQ9NQR1 393 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GRID1Q9ULK0 1009 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ZMYND8Q9ULU4 1186 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 LIN7AO14910 233 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 KRT10P13645 584 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GNAZP19086 355 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 NPTX2P47972 431 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ARSEP51690 589 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 IRX1P78414 480 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GCNT1Q02742 428 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 CYP24A1Q07973 514 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GPS1Q13098 491 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GLIS1Q8NBF1 620 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ANKRD27Q96NW4 1050 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 SERPINA10Q9UK55 444 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 UMODL1Q5DID0 1318 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 DNALI1O14645 258 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ENTPD3O75355 529 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 PECAM1P16284 738 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SPP2Q13103 211 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SLC1A5Q15758 541 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SEPT7Q16181 437 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 AOC3Q16853 763 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 TKFCQ3LXA3 575 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 TAF1BQ53T94 588 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 LMBRD2Q68DH5 695 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ANKS1BQ7Z6G8 1248 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 MAP4K3Q8IVH8 894 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 KATNAL2Q8IYT4 538 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ZBED8Q8IZ13 594 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 MFSD14AQ96MC6 490 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 FAM213AQ9BRX8 229 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 YIPF3Q9GZM5 350 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 AGO4Q9HCK5 861 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ZFP69BQ9UJL9 534 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 DNPEPQ9ULA0 475 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 CCPG1Q9ULG6 757 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SYNPO2Q9UMS6 1093 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ZNFX1Q9P2E3 1918 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 TCP10L2B9ZVM9 353 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ECE2O60344 883 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 TPBGLP0DKB5 382 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ETS1P14921 441 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 GTF2H1P32780 548 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 MTMR1Q13613 665 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 WDR44Q5JSH3 913 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 EXD1Q8NHP7 514 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SLC7A6OSQ96CW6 309 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 BICD1Q96G01 975 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 TIPINQ9BVW5 301 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 MRPL47Q9HD33 250 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 NPHS2Q9NP85 383 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 SENP1Q9P0U3 644 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ZFATQ9P243 1243 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 LY75O60449 1722 aa14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 ASTN2O75129 1339 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-202ENST00000561976 A0A1W2PPM1 405 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 HNRNPDLO14979 420 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 T-ENOLP0DO92 83 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 GM2AP17900 193 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 BPIFB4P59827 614 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 NFX1Q12986 1120 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 GRIK3Q13003 919 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 ATP13A4Q4VNC1 1196 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 FYB2Q5VWT5 728 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 MON1BQ7L1V2 547 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 ZNF677Q86XU0 584 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 CCDC125Q86Z20 511 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 LMNTD2Q8IXW0 634 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 TEX9Q8N6V9 391 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 TTC8Q8TAM2 541 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 C10orf82Q8WW14 230 aa14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 PRMT6Q96LA8 375 aaPredicted RBP14.77□□□□□ -0.04
VPS9D1-202ENST00000561976 WDR91A4D1P6 747 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 ATP2A1O14983 1001 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 LIASO43766 372 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 PDHA1P08559 390 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms