RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 HOXA11P31270 313 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PHKA2P46019 1235 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 FLT3LGP49771 235 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 WDR4P57081 412 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 GJA9P57773 515 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PURAQ00577 322 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 BEX3Q00994 111 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 GCNT1Q02742 428 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 CETN1Q12798 172 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 KIF5AQ12840 1032 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 NAA30Q147X3 362 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ARHGEF6Q15052 776 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ARHGAP44Q17R89 818 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 C10orf76Q5T2E6 689 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ALKBH5Q6P6C2 394 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 TRAPPC11Q7Z392 1133 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 SRGAP1Q7Z6B7 1085 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ZBTB33Q86T24 672 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 USP37Q86T82 979 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF410Q86VK4 478 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DNAAF5Q86Y56 855 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PALB2Q86YC2 1186 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 WDR49Q8IV35 697 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 FMNL3Q8IVF7 1028 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 EFCAB13Q8IY85 973 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 TMEM192Q8IY95 271 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 RNF10Q8N5U6 811 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 CEP120Q8N960 986 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 SLC20A1Q8WUM9 679 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DDX1Q92499 740 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 FOXJ1Q92949 421 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ELMO3Q96BJ8 720 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 SPACA7Q96KW9 195 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ZFP42Q96MM3 310 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 NT5C1BQ96P26 610 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PCDHB18PQ96TA0 734 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 NAPGQ99747 312 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 AGPAT1Q99943 283 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PI4K2AQ9BTU6 479 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 MCOLN1Q9GZU1 580 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DEF6Q9H4E7 631 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ANKFY1Q9P2R3 1169 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 CDC23Q9UJX2 597 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 INTUQ9ULD6 942 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 CNTN6Q9UQ52 1028 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PTCH2Q9Y6C5 1203 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 NCANO14594 1321 aa7.02□□□□□ -1.28
CAPN3-210ENST00000561817 A0A0A6YYK5 440 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 A0A1B0GUA9 196 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ANO9A1A5B4 782 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CTAGE9A4FU28 777 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ANKRD33BA6NCL7 494 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CREB3O43889 395 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ADAMTS4O75173 837 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CSDE1O75534 798 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 URI1O94763 535 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 IPO7O95373 1038 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 MOCS3O95396 460 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 SGPL1O95470 568 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ASS1P00966 412 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CST3P01034 146 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ATP1A1P05023 1023 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 AKR1A1P14550 325 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ELNP15502 786 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TMOD1P28289 359 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 HOXD10P28358 340 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CPT1AP50416 773 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF132P52740 706 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 AP3M2P53677 418 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 MFAP3P55082 362 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF200P98182 395 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 FMO1Q01740 532 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 NCBP1Q09161 790 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TUBB2AQ13885 445 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 AGERQ15109 404 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TCEAL1Q15170 157 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 FSCN1Q16658 493 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TUSC1Q2TAM9 212 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF568Q3ZCX4 644 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 MAP3K21Q5TCX8 1036 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 SPOPLQ6IQ16 392 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CCSAPQ6IQ19 270 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 MRPL14Q6P1L8 145 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 NFRKBQ6P4R8 1299 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 RSRC2Q7L4I2 434 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ENOSF1Q7L5Y1 443 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CDR2LQ86X02 465 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 GLYCTKQ8IVS8 523 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 LRRC57Q8N9N7 239 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 KLHDC9Q8NEP7 349 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 EPS8L1Q8TE68 723 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 SH3TC2Q8TF17 1288 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 PPP1R13LQ8WUF5 828 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ANKRD7Q92527 254 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms