RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PLEKHA5Q9HAU0 1116 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.5■■□□□ 1.991e-9■■■■■ 33.5
NME3-202ENST00000561637 FBXL5Q9UKA1 691 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 CPSF3Q9UKF6 684 aaKnown RBP27.5■■□□□ 1.99
NME3-202ENST00000561637 TIMM13Q9Y5L4 95 aaPredicted RBP27.5■■□□□ 1.99
NME3-202ENST00000561637 PPP1R37O75864 691 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 NFICP08651 508 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 HNRNPA1P09651 372 aaKnown RBP eCLIP27.49■■□□□ 1.99
NME3-202ENST00000561637 ACOT2P49753 483 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 CASP5P51878 434 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 JADE1Q6IE81 842 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 SLC8B1Q6J4K2 584 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 LINC00301Q8NCQ3 95 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 ZSWIM2Q8NEG5 633 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 CNTNAP3BQ96NU0 1288 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 CNTNAP3Q9BZ76 1288 aa27.49■■□□□ 1.99
NME3-202ENST00000561637 RPF1Q9H9Y2 349 aaKnown RBP27.49■■□□□ 1.99
NME3-202ENST00000561637 DNMT3BQ9UBC3 853 aaKnown RBP27.49■■□□□ 1.99
NME3-202ENST00000561637 SYN3O14994 580 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 SEC24AO95486 1093 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 LRPAP1P30533 357 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 STK38Q15208 465 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 SV2BQ7L1I2 683 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 ZNF720Q7Z2F6 126 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 SPRYD3Q8NCJ5 442 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 STRA6Q9BX79 667 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 ST6GALNAC4Q9H4F1 302 aa27.48■■□□□ 1.99
NME3-202ENST00000561637 MORC2Q9Y6X9 1032 aaPredicted RBP27.48■■□□□ 1.99
NME3-202ENST00000561637 TPRP12270 2363 aaKnown RBP27.48■■□□□ 1.99
NME3-202ENST00000561637 KMT2BQ9UMN6 2715 aaPredicted RBP27.47■■□□□ 1.99
NME3-202ENST00000561637 ANK1P16157 1881 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 EPG5Q9HCE0 2579 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 SPTBN2O15020 2390 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 NRG2O14511 850 aaPredicted RBP27.47■■□□□ 1.99
NME3-202ENST00000561637 ADRB2P07550 413 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 HOXA9P31269 272 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 TXLNAP40222 546 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 STAT6P42226 847 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 STARD6P59095 220 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 GPC5P78333 572 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 PKP1Q13835 747 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 CTXN3Q4LDR2 81 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 POTEHQ6S545 545 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 FGF14Q92915 247 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 UBQLN1Q9UMX0 589 aaKnown RBP27.47■■□□□ 1.99
NME3-202ENST00000561637 PCDHB8Q9UN66 801 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 GTF3C3Q9Y5Q9 886 aa27.47■■□□□ 1.99
NME3-202ENST00000561637 ABLIM3O94929 683 aa27.46■■□□□ 1.99
NME3-202ENST00000561637 ADSSP30520 456 aa27.46■■□□□ 1.99
NME3-202ENST00000561637 WNT7BP56706 349 aa27.46■■□□□ 1.99
NME3-202ENST00000561637 ING5Q8WYH8 240 aa27.46■■□□□ 1.99
NME3-202ENST00000561637 SPTLC1O15269 473 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 XYLBO75191 536 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 OR4Q2P0C623 313 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 IDEP14735 1019 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 SNW1Q13573 536 aaKnown RBP27.45■■□□□ 1.98
NME3-202ENST00000561637 SLC5A9Q2M3M2 681 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 ADALQ6DHV7 355 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 PARM1Q6UWI2 310 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 CCDC73Q6ZRK6 1079 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 HSCBQ8IWL3 235 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 ZNF461Q8TAF7 563 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 FAM84AQ96KN4 292 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 MRPL44Q9H9J2 332 aaKnown RBP27.45■■□□□ 1.98
NME3-202ENST00000561637 STYXL1Q9Y6J8 313 aa27.45■■□□□ 1.98
NME3-202ENST00000561637 M0QZQ0 153 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 SPTLC2O15270 562 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 KINO60870 393 aaKnown RBP27.44■■□□□ 1.98
NME3-202ENST00000561637 CYP3A5P20815 502 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 AARSP49588 968 aaKnown RBP eCLIP27.44■■□□□ 1.98
NME3-202ENST00000561637 SPATA1Q5VX52 437 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 CRELD2Q6UXH1 353 aaPredicted RBP27.44■■□□□ 1.98
NME3-202ENST00000561637 GLIS3Q8NEA6 775 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 FGF13Q92913 245 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 HPS3Q969F9 1004 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 AGO2Q9UKV8 859 aaKnown RBP27.44■■□□□ 1.98
NME3-202ENST00000561637 CDH7Q9ULB5 785 aa27.44■■□□□ 1.98
NME3-202ENST00000561637 MTF2Q9Y483 593 aaPredicted RBP27.44■■□□□ 1.98
NME3-202ENST00000561637 H7C4K7 107 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 VNN2O95498 520 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 SCP2P22307 547 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 KYAT1Q16773 422 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 UVSSAQ2YD98 709 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 ZNF280DQ6N043 979 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 CYP4F11Q9HBI6 524 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 SCN1AP35498 2009 aa27.43■■□□□ 1.98
NME3-202ENST00000561637 FRMD3A2A2Y4 597 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 PRRG1O14668 218 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 GCNT3O95395 438 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 POU2F2P09086 479 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 GAP43P17677 238 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 CDR1P51861 262 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 E2F4Q16254 413 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 PABPC1LQ4VXU2 614 aaKnown RBP27.42■■□□□ 1.98
NME3-202ENST00000561637 SHC4Q6S5L8 630 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 RNF19BQ6ZMZ0 732 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 NPAS3Q8IXF0 933 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 EFCAB13Q8IY85 973 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 APPL2Q8NEU8 664 aa27.42■■□□□ 1.98
NME3-202ENST00000561637 DDX23Q9BUQ8 820 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms