RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 ITGA8P53708 1063 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 IRX1P78414 480 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 RBP5P82980 135 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 CENPCQ03188 943 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 PTGISQ16647 500 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 RABL6Q3YEC7 729 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 C6orf10Q5SRN2 563 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 TTC39BQ5VTQ0 682 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 MFN1Q8IWA4 741 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 KIF2BQ8N4N8 673 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 DPYSL4O14531 572 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 ADCY3O60266 1144 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 COPB2P35606 906 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 KYNUQ16719 465 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 CCDC92Q53HC0 331 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 TRAPPC11Q7Z392 1133 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 CYGBQ8WWM9 190 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 C20orf96Q9NUD7 363 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 TBC1D23Q9NUY8 699 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 ATP11BQ9Y2G3 1177 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 AIM2O14862 343 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 CCDC159P0C7I6 412 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 SLC9A1P19634 815 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 SPRP35270 261 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 RGS7P49802 495 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 XKR3Q5GH77 459 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 C3orf62Q6ZUJ4 267 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 NSMCE4AQ9NXX6 385 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 ATPAF2Q8N5M1 289 aa13.26□□□□□ -0.29
SYNM-203ENST00000560674 NOA1Q8NC60 698 aaKnown RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 RPAP3Q9H6T3 665 aaPredicted RBP13.26□□□□□ -0.29
SYNM-203ENST00000560674 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 WDR47O94967 919 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 SEC24CP53992 1094 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 MED15Q96RN5 788 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 CELF4Q9BZC1 486 aaKnown RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 SLC40A1Q9NP59 571 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 S100A5P33763 92 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 DCUN1D1Q96GG9 259 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNM-203ENST00000560674 HNRNPRO43390 633 aaKnown RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 ADRA2BP18089 450 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 CACNB2Q08289 660 aaPredicted RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNM-203ENST00000560674 APPL2Q8NEU8 664 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 SYN2Q92777 582 aaPredicted RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 MANSC1Q9H8J5 431 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 ASB14A6NK59 587 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 OCM2P0CE71 109 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 OCMP0CE72 109 aaPredicted RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 RXRBP28702 533 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 PLA2G4AP47712 749 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 SPDYAQ5MJ70 313 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 DDX50Q9BQ39 737 aaKnown RBP13.25□□□□□ -0.29
SYNM-203ENST00000560674 SNX9Q9Y5X1 595 aa13.25□□□□□ -0.29
SYNM-203ENST00000560674 ENO4A6NNW6 628 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYNM-203ENST00000560674 HIST1H2AGP0C0S8 130 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 HIST1H2ADP20671 130 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 KLK7P49862 253 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 LAMB3Q13751 1172 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 SETD3Q86TU7 594 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 NSL1Q96IY1 281 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 HIST1H2AHQ96KK5 128 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 HIST1H2AJQ99878 128 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 H2AFJQ9BTM1 129 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 CXorf56Q9H5V9 222 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 GRID1Q9ULK0 1009 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 ALG6Q9Y672 507 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 GALNT4Q8N4A0 578 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 B4GALNT2Q8NHY0 566 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 OTULINQ96BN8 352 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 FAM129AQ9BZQ8 928 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 LRRC7Q96NW7 1537 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 EEF2KO00418 725 aaKnown RBP13.24□□□□□ -0.29
SYNM-203ENST00000560674 GRIK1P39086 918 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 BLVRAP53004 296 aa13.24□□□□□ -0.29
SYNM-203ENST00000560674 MRPS35P82673 323 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms