RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 STYXL1Q9Y6J8 313 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 FAM189A1O60320 539 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 PPP6R2O75170 966 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 ECI2O75521 394 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 IDEP14735 1019 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 NMT1P30419 496 aaKnown RBP15.26■□□□□ 0.03
TPM1-223ENST00000560445 PRKCQQ04759 706 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 ADCY1Q08828 1119 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
TPM1-223ENST00000560445 ATL3Q6DD88 541 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 OVOS1Q6IE37 1185 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 RSPO2Q6UXX9 243 aaPredicted RBP15.26■□□□□ 0.03
TPM1-223ENST00000560445 SFR1Q86XK3 245 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 NPAS3Q8IXF0 933 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 CCDC105Q8IYK2 499 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 TMEM105Q8N8V8 129 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 TNMDQ9H2S6 317 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 SMOC2Q9H3U7 446 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 MAGEF1Q9HAY2 307 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 ASAH2Q9NR71 780 aa15.26■□□□□ 0.03
TPM1-223ENST00000560445 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
TPM1-223ENST00000560445 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
TPM1-223ENST00000560445 SPTLC2O15270 562 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 GCNT3O95395 438 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 YEATS4O95619 227 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 TNFSF9P41273 254 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 MAGEA9P43362 315 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 TAF6P49848 677 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 EPHB3P54753 998 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 SV2CQ496J9 727 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 JADE1Q6IE81 842 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 ITIH5Q86UX2 942 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 THEM5Q8N1Q8 247 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 ITFG1Q8TB96 612 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 KCNG4Q8TDN1 519 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 GPR152Q8TDT2 470 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 CACTINQ8WUQ7 758 aaKnown RBP15.25■□□□□ 0.03
TPM1-223ENST00000560445 RSAD2Q8WXG1 361 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 E2F7Q96AV8 911 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 USP28Q96RU2 1077 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 FIZ1Q96SL8 496 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 CORO1BQ9BR76 489 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 TBC1D17Q9HA65 648 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 CA14Q9ULX7 337 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 ASB3Q9Y575 518 aa15.25■□□□□ 0.03
TPM1-223ENST00000560445 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
TPM1-223ENST00000560445 GARTP22102 1010 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 LILRA4P59901 499 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 NTHL1P78549 312 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 SPAG1Q07617 926 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 GPR17Q13304 367 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 ZC2HC1CQ53FD0 456 aaPredicted RBP15.24■□□□□ 0.03
TPM1-223ENST00000560445 C9orf57Q5W0N0 161 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 CWF19L1Q69YN2 538 aaKnown RBP15.24■□□□□ 0.03
TPM1-223ENST00000560445 IQUBQ8NA54 791 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 FEZF2Q8TBJ5 459 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 C2orf15Q8WU43 125 aaKnown RBP15.24■□□□□ 0.03
TPM1-223ENST00000560445 ELSPBP1Q96BH3 223 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 CLIC6Q96NY7 704 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 HAPLN2Q9GZV7 340 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 ZMYM5Q9UJ78 669 aa15.24■□□□□ 0.03
TPM1-223ENST00000560445 MRPS17Q9Y2R5 130 aaKnown RBP15.24■□□□□ 0.03
TPM1-223ENST00000560445 MYMKA6NI61 221 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 NCAM2O15394 837 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
TPM1-223ENST00000560445 PPP1R37O75864 691 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 CYP11A1P05108 521 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
TPM1-223ENST00000560445 ACOT2P49753 483 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 TWF1Q12792 350 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 SLC39A4Q6P5W5 647 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
TPM1-223ENST00000560445 PARM1Q6UWI2 310 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 DTWD2Q8NBA8 298 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 LINC00301Q8NCQ3 95 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 LRRC15Q8TF66 581 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 DNASE1L2Q92874 299 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 FGF14Q92915 247 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 NELL2Q99435 816 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 OSBPL6Q9BZF3 934 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 ZFP14Q9HCL3 533 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 HCFC1R1Q9NWW0 138 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 CFAP45Q9UL16 551 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 SIT1Q9Y3P8 196 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 YIPF1Q9Y548 306 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
TPM1-223ENST00000560445 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 PROB1E7EW31 1015 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 H0Y858 1186 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 PIRO00625 290 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms